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OPENSEQ.org

ATPF - MOCA
UniProt: P0ABA0 - Q46810
Length: 348
Sequences: 211
Seq/Len: 0.62
I_Prob: 0.06

ATPF - ATP synthase subunit b
Paralog alert: 0.13 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: ATPF
MOCA - Molybdenum cofactor cytidylyltransferase
Paralog alert: 0.71 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: MOBA MOCA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
87_L 95_C 1.80 0.06
32_A 86_A 1.61 0.04
123_Q 144_A 1.39 0.02
101_I 157_L 1.38 0.02
150_D 26_W 1.23 0.01
150_D 47_I 1.22 0.01
107_A 149_N 1.17 0.01
105_A 178_T 1.17 0.01
5_A 144_A 1.14 0.01
107_A 46_I 1.14 0.01
141_D 54_G 1.14 0.01
111_A 67_I 1.13 0.01
121_R 70_I 1.12 0.01
47_A 61_Y 1.12 0.01
82_R 173_I 1.12 0.01
115_R 174_L 1.11 0.01
12_I 49_V 1.10 0.01
135_I 138_K 1.10 0.01
83_R 114_W 1.10 0.01
149_V 19_Q 1.09 0.01
50_A 32_L 1.09 0.01
12_I 178_T 1.09 0.01
142_E 94_H 1.07 0.01
99_T 162_H 1.06 0.01
16_L 144_A 1.06 0.01
105_A 176_I 1.06 0.01
93_E 121_A 1.04 0.01
100_K 31_I 1.04 0.01
149_V 97_L 1.04 0.01
152_L 135_L 1.02 0.01
141_D 35_S 1.02 0.01
58_K 47_I 1.02 0.01
80_N 179_P 1.02 0.01
65_L 6_C 1.01 0.01
16_L 164_S 1.01 0.01
63_D 106_T 1.00 0.01
138_R 50_T 1.00 0.01
135_I 48_L 1.00 0.01
9_G 181_D 1.00 0.01
116_A 26_W 0.99 0.01
104_Q 31_I 0.99 0.01
154_A 144_A 0.98 0.01
98_R 94_H 0.98 0.01
98_R 57_L 0.98 0.01
140_V 168_E 0.98 0.01
48_E 122_I 0.97 0.01
122_K 55_N 0.97 0.01
136_I 178_T 0.96 0.01
102_V 57_L 0.96 0.01
128_A 24_L 0.96 0.01
29_L 114_W 0.95 0.01
148_I 69_I 0.95 0.01
140_V 94_H 0.95 0.01
56_L 176_I 0.95 0.01
148_I 105_L 0.94 0.01
60_S 136_V 0.94 0.01
106_Q 110_F 0.94 0.01
77_E 176_I 0.94 0.01
88_D 56_E 0.93 0.01
136_I 122_I 0.93 0.01
60_S 165_V 0.93 0.01
142_E 75_Y 0.93 0.01
153_V 39_A 0.93 0.01
105_A 111_R 0.93 0.01
34_E 113_I 0.92 0.00
16_L 55_N 0.91 0.00
83_R 57_L 0.91 0.00
155_E 32_L 0.91 0.00
76_I 46_I 0.91 0.00
86_I 8_I 0.91 0.00
108_E 35_S 0.91 0.00
106_Q 59_E 0.91 0.00
112_E 162_H 0.91 0.00
24_Y 162_H 0.90 0.00
101_I 93_E 0.90 0.00
59_A 58_H 0.90 0.00
16_L 41_Q 0.89 0.00
117_R 180_D 0.89 0.00
16_L 63_N 0.89 0.00
35_K 145_I 0.89 0.00
76_I 132_H 0.89 0.00
21_C 29_G 0.89 0.00
68_A 109_I 0.88 0.00
118_E 19_Q 0.88 0.00
129_V 65_S 0.88 0.00
8_L 105_L 0.88 0.00
68_A 46_I 0.88 0.00
11_A 31_I 0.87 0.00
21_C 27_E 0.87 0.00
88_D 164_S 0.86 0.00
66_K 122_I 0.86 0.00
86_I 32_L 0.86 0.00
123_Q 112_K 0.86 0.00
91_K 19_Q 0.86 0.00
76_I 69_I 0.86 0.00
77_E 157_L 0.85 0.00
41_A 185_A 0.85 0.00
75_I 29_G 0.85 0.00
85_Q 31_I 0.85 0.00
17_F 137_S 0.85 0.00
52_K 174_L 0.85 0.00
55_D 88_P 0.84 0.00
131_G 144_A 0.84 0.00
31_A 58_H 0.84 0.00
140_V 176_I 0.84 0.00
7_I 133_P 0.83 0.00
102_V 65_S 0.83 0.00
152_L 39_A 0.83 0.00
65_L 187_E 0.83 0.00
123_Q 49_V 0.83 0.00
95_E 84_K 0.83 0.00
59_A 67_I 0.82 0.00
119_E 133_P 0.82 0.00
58_K 145_I 0.82 0.00
53_D 174_L 0.82 0.00
134_K 29_G 0.82 0.00
116_A 176_I 0.82 0.00
73_Q 123_L 0.82 0.00
109_I 32_L 0.82 0.00
151_K 159_M 0.82 0.00
149_V 112_K 0.82 0.00
134_K 146_Q 0.82 0.00
71_E 121_A 0.81 0.00
128_A 151_T 0.81 0.00
95_E 180_D 0.81 0.00
110_E 25_P 0.81 0.00
92_A 156_A 0.81 0.00
83_R 13_L 0.81 0.00
149_V 179_P 0.80 0.00
150_D 7_I 0.80 0.00
74_V 46_I 0.80 0.00
116_A 28_Q 0.80 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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