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OPENSEQ.org

KBL - TDH
UniProt: P0AB77 - P07913
Length: 739
Sequences: 593
Seq/Len: 0.81
I_Prob: 0.00

KBL - 2-amino-3-ketobutyrate coenzyme A ligase
Paralog alert: 0.62 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: BIOF KBL
TDH - L-threonine 3-dehydrogenase
Paralog alert: 0.83 [within 20: 0.37] - ratio of genomes with paralogs
Cluster includes: ACUI ADHP CURA FRMA GATD IDND QOR1 RSPB TDH YAHK YBDR YCJQ YDJJ YDJL YGGP YJGB YJJN YPHC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
177_L 144_A 1.04 0.00
311_E 191_V 0.99 0.00
284_A 42_V 0.94 0.00
352_V 30_I 0.94 0.00
41_G 18_V 0.94 0.00
159_Q 125_L 0.91 0.00
223_R 319_D 0.86 0.00
344_E 69_V 0.85 0.00
306_A 100_R 0.83 0.00
262_E 69_V 0.83 0.00
357_Y 31_K 0.82 0.00
376_T 123_E 0.81 0.00
96_L 81_I 0.81 0.00
68_G 77_K 0.80 0.00
354_G 69_V 0.79 0.00
118_L 257_G 0.79 0.00
158_M 69_V 0.75 0.00
122_L 83_D 0.75 0.00
259_E 83_D 0.75 0.00
260_V 301_L 0.75 0.00
178_I 281_L 0.75 0.00
14_E 2_K 0.75 0.00
45_I 218_E 0.74 0.00
292_V 308_L 0.74 0.00
122_L 224_M 0.73 0.00
204_D 14_W 0.73 0.00
43_H 31_K 0.72 0.00
98_A 180_A 0.72 0.00
96_L 270_S 0.72 0.00
129_I 215_V 0.71 0.00
101_G 225_A 0.70 0.00
307_R 213_V 0.69 0.00
67_A 222_D 0.69 0.00
254_T 132_A 0.69 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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