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OPENSEQ.org

THIO - YJEE
UniProt: P0AA25 - P0AF67
Length: 262
Sequences: 246
Seq/Len: 0.97
I_Prob: 0.01

THIO - Thioredoxin-1
Paralog alert: 0.85 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: THIO2 THIO
YJEE - UPF0079 ATP-binding protein YjeE
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YJEE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
54_L 63_Y 1.42 0.01
75_G 113_G 1.36 0.00
61_I 42_T 1.32 0.00
60_N 50_Q 1.27 0.00
29_W 106_L 1.26 0.00
106_A 57_N 1.25 0.00
37_K 98_Y 1.17 0.00
89_A 62_T 1.16 0.00
74_R 93_M 1.14 0.00
52_G 107_V 1.14 0.00
47_A 82_Y 1.13 0.00
46_I 10_D 1.07 0.00
53_K 89_E 1.06 0.00
80_L 62_T 1.05 0.00
44_D 122_V 1.05 0.00
103_F 29_T 1.05 0.00
20_A 25_C 1.04 0.00
65_P 67_E 1.02 0.00
9_T 122_V 1.02 0.00
54_L 137_V 1.01 0.00
103_F 92_F 1.00 0.00
16_D 10_D 0.98 0.00
17_V 92_F 0.96 0.00
47_A 102_D 0.96 0.00
7_H 62_T 0.96 0.00
15_T 31_I 0.95 0.00
12_S 143_A 0.94 0.00
90_T 79_F 0.93 0.00
79_L 29_T 0.93 0.00
72_G 89_E 0.92 0.00
44_D 12_Q 0.92 0.00
103_F 67_E 0.92 0.00
59_L 21_V 0.92 0.00
24_I 116_V 0.92 0.00
74_R 141_S 0.92 0.00
89_A 79_F 0.92 0.00
21_D 135_A 0.92 0.00
7_H 45_S 0.91 0.00
6_I 105_C 0.91 0.00
74_R 81_L 0.91 0.00
22_G 104_I 0.91 0.00
24_I 107_V 0.90 0.00
18_L 42_T 0.90 0.00
86_E 88_E 0.90 0.00
18_L 37_L 0.90 0.00
40_A 36_D 0.89 0.00
19_K 101_N 0.89 0.00
15_T 126_I 0.89 0.00
39_I 59_K 0.89 0.00
78_T 37_L 0.89 0.00
107_N 86_D 0.88 0.00
47_A 111_Q 0.88 0.00
46_I 77_Y 0.88 0.00
103_F 59_K 0.88 0.00
17_V 45_S 0.88 0.00
28_F 29_T 0.87 0.00
103_F 93_M 0.87 0.00
28_F 33_L 0.87 0.00
51_Q 97_D 0.86 0.00
86_E 23_K 0.86 0.00
90_T 43_T 0.86 0.00
81_L 26_D 0.86 0.00
74_R 110_P 0.86 0.00
79_L 49_L 0.85 0.00
89_A 85_A 0.85 0.00
38_M 56_G 0.85 0.00
100_L 39_A 0.85 0.00
45_E 93_M 0.84 0.00
88_A 116_V 0.84 0.00
84_N 88_E 0.84 0.00
79_L 27_G 0.84 0.00
10_D 87_P 0.84 0.00
31_E 84_L 0.83 0.00
81_L 30_V 0.83 0.00
48_D 6_I 0.83 0.00
5_I 97_D 0.83 0.00
69_P 89_E 0.82 0.00
63_Q 50_Q 0.82 0.00
102_E 48_F 0.82 0.00
81_L 52_L 0.81 0.00
26_V 131_Q 0.81 0.00
67_T 24_A 0.81 0.00
68_A 20_R 0.81 0.00
73_I 30_V 0.80 0.00
53_K 51_A 0.80 0.00
84_N 28_A 0.80 0.00
84_N 116_V 0.80 0.00
60_N 106_L 0.79 0.00
25_L 126_I 0.79 0.00
43_L 59_K 0.79 0.00
62_D 81_L 0.79 0.00
101_K 146_L 0.79 0.00
29_W 8_L 0.78 0.00
37_K 44_F 0.78 0.00
87_V 124_I 0.78 0.00
42_I 27_G 0.77 0.00
39_I 95_I 0.77 0.00
105_D 143_A 0.77 0.00
78_T 43_T 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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