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OPENSEQ.org

MREB - NSRR
UniProt: P0A9X4 - P0AF63
Length: 488
Sequences: 344
Seq/Len: 0.76
I_Prob: 0.02

MREB - Rod shape-determining protein MreB
Paralog alert: 0.79 [within 20: 0.09] - ratio of genomes with paralogs
Cluster includes: DNAK HSCA HSCC MREB YEGD
NSRR - HTH-type transcriptional repressor NsrR
Paralog alert: 0.62 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: ISCR NSRR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
270_A 118_E 1.63 0.02
68_G 76_I 1.52 0.02
198_I 130_E 1.39 0.01
223_G 131_N 1.34 0.01
55_V 75_R 1.30 0.01
327_R 79_V 1.27 0.01
175_V 126_D 1.25 0.01
223_G 54_Y 1.22 0.01
260_L 9_Y 1.22 0.01
125_A 17_M 1.21 0.01
266_G 128_V 1.20 0.01
155_V 5_S 1.20 0.01
293_L 32_T 1.16 0.01
53_A 2_Q 1.15 0.01
125_A 5_S 1.14 0.01
318_A 5_S 1.12 0.01
21_N 94_E 1.12 0.01
302_N 51_R 1.07 0.01
55_V 33_D 1.07 0.01
70_I 101_A 1.06 0.01
125_A 116_L 1.06 0.00
198_I 71_A 1.05 0.00
271_V 30_E 1.05 0.00
252_N 123_T 1.04 0.00
141_I 82_E 1.04 0.00
300_L 9_Y 1.04 0.00
82_A 17_M 1.03 0.00
290_G 9_Y 1.01 0.00
247_R 36_G 1.01 0.00
149_I 71_A 1.01 0.00
241_L 56_T 1.01 0.00
100_S 125_A 0.98 0.00
248_G 73_A 0.98 0.00
290_G 112_V 0.97 0.00
290_G 78_D 0.95 0.00
198_I 36_G 0.95 0.00
66_T 97_H 0.95 0.00
206_Y 75_R 0.94 0.00
266_G 51_R 0.93 0.00
285_D 53_G 0.93 0.00
55_V 71_A 0.92 0.00
63_L 2_Q 0.92 0.00
236_V 73_A 0.91 0.00
223_G 125_A 0.91 0.00
124_R 128_V 0.90 0.00
221_E 126_D 0.90 0.00
257_L 81_R 0.90 0.00
131_Q 95_F 0.89 0.00
42_R 2_Q 0.89 0.00
131_Q 69_K 0.89 0.00
253_S 67_L 0.89 0.00
305_R 122_Y 0.89 0.00
50_K 70_P 0.88 0.00
200_N 121_N 0.88 0.00
78_D 48_Q 0.88 0.00
180_G 128_V 0.88 0.00
305_R 22_E 0.86 0.00
259_A 66_R 0.86 0.00
85_F 17_M 0.86 0.00
267_I 84_E 0.85 0.00
290_G 47_N 0.85 0.00
92_Q 33_D 0.85 0.00
163_V 71_A 0.85 0.00
206_Y 76_I 0.84 0.00
223_G 73_A 0.84 0.00
103_F 69_K 0.84 0.00
96_K 129_E 0.84 0.00
250_T 72_S 0.84 0.00
223_G 95_F 0.84 0.00
82_A 79_V 0.83 0.00
108_P 66_R 0.82 0.00
81_I 113_Q 0.82 0.00
280_P 71_A 0.82 0.00
77_K 70_P 0.82 0.00
324_C 3_L 0.81 0.00
236_V 125_A 0.81 0.00
214_T 78_D 0.81 0.00
283_A 22_E 0.81 0.00
241_L 71_A 0.81 0.00
332_A 61_K 0.81 0.00
32_V 14_L 0.81 0.00
272_M 79_V 0.81 0.00
55_V 125_A 0.81 0.00
260_L 84_E 0.80 0.00
180_G 130_E 0.80 0.00
55_V 74_I 0.80 0.00
223_G 19_S 0.80 0.00
95_I 116_L 0.80 0.00
146_A 18_A 0.80 0.00
266_G 52_A 0.80 0.00
155_V 17_M 0.80 0.00
323_T 125_A 0.80 0.00
319_E 103_R 0.79 0.00
206_Y 123_T 0.79 0.00
31_I 72_S 0.79 0.00
327_R 56_T 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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