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OPENSEQ.org

MREB - RODA
UniProt: P0A9X4 - P0ABG7
Length: 717
Sequences: 1095
Seq/Len: 1.59
I_Prob: 0.07

MREB - Rod shape-determining protein MreB
Paralog alert: 0.79 [within 20: 0.09] - ratio of genomes with paralogs
Cluster includes: DNAK HSCA HSCC MREB YEGD
RODA - Rod shape-determining protein RodA
Paralog alert: 0.89 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: FTSW RODA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
224_S 269_A 1.40 0.07
187_V 78_L 1.09 0.03
140_L 211_V 1.09 0.03
87_T 160_L 1.04 0.03
77_K 325_V 1.04 0.03
317_V 55_M 1.03 0.02
85_F 35_I 1.02 0.02
317_V 119_A 0.98 0.02
29_Q 87_V 0.98 0.02
309_E 269_A 0.97 0.02
14_S 332_V 0.97 0.02
175_V 234_A 0.95 0.02
118_A 253_L 0.95 0.02
317_V 87_V 0.94 0.02
317_V 326_S 0.93 0.02
150_G 226_Y 0.93 0.02
271_V 211_V 0.93 0.02
196_E 241_R 0.92 0.02
181_V 157_Q 0.92 0.02
164_V 194_F 0.91 0.02
236_V 357_M 0.90 0.02
128_E 296_A 0.90 0.02
55_V 157_Q 0.90 0.01
223_G 112_P 0.89 0.01
256_I 62_V 0.89 0.01
65_R 252_Q 0.88 0.01
77_K 78_L 0.88 0.01
60_K 214_L 0.88 0.01
128_E 36_W 0.88 0.01
148_A 107_I 0.88 0.01
164_V 356_V 0.88 0.01
271_V 307_A 0.87 0.01
208_S 121_P 0.87 0.01
313_I 112_P 0.87 0.01
190_G 64_A 0.87 0.01
121_V 160_L 0.87 0.01
65_R 350_M 0.87 0.01
115_P 112_P 0.87 0.01
110_V 123_M 0.86 0.01
55_V 354_G 0.86 0.01
251_L 241_R 0.86 0.01
164_V 84_I 0.86 0.01
168_G 29_V 0.85 0.01
17_L 83_I 0.84 0.01
238_G 230_Q 0.84 0.01
318_A 280_L 0.83 0.01
174_A 125_A 0.83 0.01
234_I 110_F 0.82 0.01
52_V 26_A 0.82 0.01
272_M 294_I 0.82 0.01
164_V 318_V 0.82 0.01
294_T 272_L 0.81 0.01
110_V 48_R 0.81 0.01
179_N 288_I 0.81 0.01
222_I 275_V 0.81 0.01
190_G 99_A 0.81 0.01
230_E 107_I 0.81 0.01
321_P 108_V 0.81 0.01
166_I 140_T 0.81 0.01
164_V 168_L 0.81 0.01
175_V 149_M 0.81 0.01
166_I 31_S 0.80 0.01
179_N 336_L 0.80 0.01
205_N 39_S 0.80 0.01
251_L 80_I 0.80 0.01
104_M 105_L 0.80 0.01
84_F 155_A 0.80 0.01
256_I 219_S 0.80 0.01
29_Q 73_G 0.79 0.01
166_I 103_L 0.79 0.01
118_A 154_V 0.79 0.01
31_I 256_L 0.79 0.01
324_C 145_V 0.78 0.01
183_Y 101_R 0.78 0.01
175_V 64_A 0.78 0.01
326_A 279_I 0.78 0.01
294_T 234_A 0.78 0.01
294_T 127_F 0.78 0.01
206_Y 31_S 0.78 0.01
83_D 191_V 0.78 0.01
112_V 278_L 0.77 0.01
288_E 89_V 0.77 0.01
294_T 339_V 0.77 0.01
100_S 140_T 0.77 0.01
76_M 160_L 0.76 0.01
236_V 38_A 0.76 0.01
53_A 314_L 0.76 0.01
287_S 51_G 0.76 0.01
162_M 103_L 0.76 0.01
263_P 175_F 0.76 0.01
291_M 108_V 0.76 0.01
198_I 105_L 0.76 0.01
140_L 281_L 0.76 0.01
285_D 338_L 0.76 0.01
264_L 36_W 0.76 0.01
248_G 353_F 0.76 0.01
41_I 264_I 0.76 0.01
298_A 232_K 0.76 0.01
192_D 243_K 0.75 0.01
150_G 150_P 0.75 0.01
95_I 94_A 0.75 0.01
147_A 282_A 0.75 0.01
187_V 137_L 0.75 0.01
228_G 128_I 0.75 0.01
194_F 143_A 0.75 0.01
202_V 247_H 0.75 0.01
203_R 39_S 0.75 0.01
25_Y 326_S 0.75 0.01
332_A 346_L 0.75 0.01
246_P 305_V 0.75 0.01
198_I 55_M 0.75 0.01
256_I 190_L 0.75 0.01
261_Q 38_A 0.74 0.01
52_V 309_G 0.74 0.01
114_V 284_Y 0.74 0.01
293_L 103_L 0.74 0.01
220_H 190_L 0.74 0.01
52_V 144_L 0.74 0.01
133_A 228_I 0.74 0.01
238_G 237_S 0.73 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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