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OPENSEQ.org

PHOL - YAFV
UniProt: P0A9K3 - Q47679
Length: 602
Sequences: 380
Seq/Len: 0.72
I_Prob: 0.00

PHOL - PhoH-like protein
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PHOL
YAFV - UPF0012 hydrolase YafV
Paralog alert: 0.77 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: YAFV YBEM YOBB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
314_A 187_Y 1.47 0.00
32_L 181_A 1.35 0.00
80_I 29_L 1.31 0.00
89_I 39_V 1.31 0.00
274_I 208_R 1.25 0.00
129_I 161_Y 1.18 0.00
31_Q 188_V 1.18 0.00
244_S 149_W 1.12 0.00
15_N 109_H 1.11 0.00
118_I 131_W 1.09 0.00
129_I 59_Q 1.09 0.00
239_I 175_A 1.08 0.00
244_S 161_Y 1.05 0.00
228_Y 11_Q 1.04 0.00
266_V 37_V 1.04 0.00
264_K 146_F 1.03 0.00
141_V 231_E 1.03 0.00
8_I 231_E 1.02 0.00
314_A 230_A 1.01 0.00
274_I 140_V 1.01 0.00
180_K 163_A 0.99 0.00
115_R 43_M 0.99 0.00
158_D 212_P 0.99 0.00
314_A 220_A 0.98 0.00
297_I 210_I 0.98 0.00
210_E 188_V 0.97 0.00
124_N 149_W 0.97 0.00
321_E 17_D 0.97 0.00
317_V 129_V 0.97 0.00
10_L 90_V 0.96 0.00
15_N 146_F 0.95 0.00
247_T 13_L 0.95 0.00
63_L 9_L 0.95 0.00
129_I 147_P 0.95 0.00
290_V 221_D 0.95 0.00
45_N 40_L 0.94 0.00
25_F 6_I 0.94 0.00
32_L 44_F 0.94 0.00
118_I 206_D 0.94 0.00
274_I 148_V 0.93 0.00
83_E 136_I 0.92 0.00
36_L 150_S 0.92 0.00
223_V 150_S 0.92 0.00
244_S 153_L 0.92 0.00
180_K 96_V 0.92 0.00
304_S 219_T 0.91 0.00
274_I 3_G 0.91 0.00
280_T 45_T 0.91 0.00
316_I 188_V 0.91 0.00
88_A 109_H 0.90 0.00
180_K 6_I 0.90 0.00
111_I 14_V 0.90 0.00
264_K 106_D 0.90 0.00
216_I 206_D 0.90 0.00
49_L 69_K 0.89 0.00
327_E 212_P 0.89 0.00
287_A 187_Y 0.88 0.00
123_P 105_Y 0.88 0.00
267_I 228_I 0.88 0.00
33_E 40_L 0.87 0.00
44_D 113_M 0.87 0.00
118_I 96_V 0.87 0.00
171_T 156_Y 0.87 0.00
160_L 48_F 0.86 0.00
133_L 175_A 0.86 0.00
122_T 142_Y 0.86 0.00
50_T 211_N 0.86 0.00
163_Q 49_A 0.85 0.00
298_S 128_I 0.85 0.00
27_D 175_A 0.84 0.00
304_S 215_E 0.84 0.00
286_H 43_M 0.84 0.00
135_H 210_I 0.84 0.00
262_N 120_Y 0.84 0.00
71_A 113_M 0.83 0.00
15_N 147_P 0.83 0.00
138_T 181_A 0.83 0.00
296_E 66_M 0.83 0.00
56_V 162_V 0.83 0.00
141_V 12_P 0.83 0.00
19_L 38_I 0.83 0.00
122_T 59_Q 0.83 0.00
249_I 146_F 0.83 0.00
85_I 162_V 0.83 0.00
262_N 210_I 0.83 0.00
158_D 122_A 0.83 0.00
314_A 229_D 0.83 0.00
211_K 106_D 0.82 0.00
321_E 218_A 0.82 0.00
29_I 73_C 0.82 0.00
211_K 38_I 0.82 0.00
56_V 216_I 0.82 0.00
279_N 78_A 0.82 0.00
267_I 229_D 0.81 0.00
63_L 212_P 0.81 0.00
167_R 130_E 0.81 0.00
297_I 158_L 0.81 0.00
244_S 139_L 0.81 0.00
263_S 166_P 0.81 0.00
311_P 114_A 0.81 0.00
289_E 160_L 0.81 0.00
57_T 210_I 0.81 0.00
272_T 221_D 0.81 0.00
213_E 177_L 0.81 0.00
312_V 43_M 0.81 0.00
292_A 181_A 0.81 0.00
153_V 190_G 0.81 0.00
37_G 122_A 0.81 0.00
165_I 37_V 0.80 0.00
132_I 37_V 0.80 0.00
169_L 77_I 0.80 0.00
111_I 96_V 0.80 0.00
66_L 29_L 0.80 0.00
120_P 169_R 0.80 0.00
171_T 187_Y 0.80 0.00
272_T 189_A 0.80 0.00
274_I 156_Y 0.79 0.00
42_R 111_F 0.79 0.00
10_L 97_E 0.79 0.00
120_P 161_Y 0.79 0.00
259_I 122_A 0.79 0.00
240_I 13_L 0.79 0.00
244_S 233_S 0.79 0.00
112_K 14_V 0.79 0.00
239_I 136_I 0.79 0.00
157_V 185_Q 0.78 0.00
129_I 224_Q 0.78 0.00
326_A 92_R 0.78 0.00
28_N 109_H 0.78 0.00
240_I 161_Y 0.78 0.00
190_Q 186_A 0.78 0.00
81_E 4_L 0.78 0.00
304_S 145_R 0.78 0.00
216_I 156_Y 0.78 0.00
115_R 113_M 0.77 0.00
307_V 230_A 0.77 0.00
67_Y 44_F 0.77 0.00
24_P 187_Y 0.77 0.00
298_S 95_L 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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