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OPENSEQ.org

DPO3B - RL34
UniProt: P0A988 - P0A7P5
Length: 412
Sequences: 426
Seq/Len: 1.04
I_Prob: 0.01

DPO3B - DNA polymerase III subunit beta
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: DPO3B
RL34 - 50S ribosomal protein L34
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL34
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
289_Q 31_L 1.38 0.01
195_V 43_T 1.28 0.00
343_S 5_F 1.26 0.00
338_M 41_R 1.25 0.00
246_R 30_V 1.20 0.00
33_L 40_A 1.14 0.00
80_R 33_R 1.13 0.00
360_V 10_L 1.13 0.00
237_V 26_N 1.12 0.00
22_G 43_T 1.12 0.00
208_D 31_L 1.11 0.00
42_L 3_R 1.04 0.00
32_N 14_R 1.00 0.00
67_A 30_V 0.99 0.00
180_C 31_L 0.99 0.00
243_D 41_R 0.98 0.00
147_A 30_V 0.98 0.00
233_T 5_F 0.98 0.00
194_I 14_R 0.97 0.00
141_A 43_T 0.96 0.00
328_L 37_K 0.95 0.00
306_L 31_L 0.95 0.00
142_T 33_R 0.95 0.00
120_D 10_L 0.94 0.00
237_V 33_R 0.93 0.00
211_D 36_A 0.93 0.00
268_A 13_N 0.92 0.00
250_K 33_R 0.92 0.00
58_A 31_L 0.92 0.00
10_L 30_V 0.92 0.00
161_E 19_R 0.91 0.00
220_S 40_A 0.91 0.00
339_M 44_V 0.91 0.00
91_Q 31_L 0.90 0.00
3_F 30_V 0.90 0.00
282_R 36_A 0.88 0.00
162_T 43_T 0.87 0.00
206_M 36_A 0.87 0.00
40_G 43_T 0.87 0.00
160_F 32_A 0.87 0.00
52_E 10_L 0.86 0.00
304_E 19_R 0.86 0.00
246_R 43_T 0.86 0.00
59_L 25_K 0.86 0.00
287_E 33_R 0.86 0.00
317_I 43_T 0.86 0.00
65_P 5_F 0.86 0.00
228_G 14_R 0.86 0.00
106_F 28_R 0.85 0.00
66_G 19_R 0.85 0.00
364_M 10_L 0.84 0.00
273_L 14_R 0.84 0.00
195_V 19_R 0.84 0.00
19_G 8_S 0.84 0.00
133_A 5_F 0.84 0.00
242_P 8_S 0.84 0.00
20_P 44_V 0.84 0.00
24_R 12_R 0.83 0.00
9_H 32_A 0.83 0.00
84_E 30_V 0.83 0.00
356_S 36_A 0.83 0.00
74_K 8_S 0.83 0.00
309_T 32_A 0.82 0.00
359_Y 5_F 0.82 0.00
85_G 13_N 0.82 0.00
172_T 11_K 0.82 0.00
257_E 14_R 0.82 0.00
114_A 14_R 0.82 0.00
123_Q 26_N 0.82 0.00
166_E 31_L 0.82 0.00
219_G 23_A 0.81 0.00
40_G 36_A 0.81 0.00
74_K 41_R 0.81 0.00
135_M 30_V 0.81 0.00
218_I 36_A 0.80 0.00
323_Y 12_R 0.80 0.00
339_M 43_T 0.79 0.00
71_P 30_V 0.79 0.00
298_E 3_R 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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