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OPENSEQ.org

CHEW - MCP2
UniProt: P0A964 - P07017
Length: 720
Sequences: 528
Seq/Len: 0.79
I_Prob: 0.00

CHEW - Chemotaxis protein CheW
Paralog alert: 0.58 [within 20: 0.15] - ratio of genomes with paralogs
Cluster includes: CHEW
MCP2 - Methyl-accepting chemotaxis protein II
Paralog alert: 0.85 [within 20: 0.29] - ratio of genomes with paralogs
Cluster includes: AER MCP1 MCP2 MCP3 MCP4
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
36_V 318_A 1.23 0.00
39_I 352_I 1.17 0.00
55_I 20_L 1.10 0.00
87_V 392_R 1.10 0.00
152_N 195_A 1.06 0.00
20_L 461_S 1.06 0.00
42_Y 436_A 1.04 0.00
49_A 314_V 1.03 0.00
91_L 390_Q 1.02 0.00
41_G 371_F 1.02 0.00
107_D 292_R 1.01 0.00
40_R 282_I 0.98 0.00
30_G 468_I 0.97 0.00
41_G 409_A 0.93 0.00
147_I 307_M 0.92 0.00
39_I 382_V 0.91 0.00
75_F 220_L 0.91 0.00
102_V 494_A 0.91 0.00
71_L 389_E 0.90 0.00
39_I 413_K 0.89 0.00
19_F 509_A 0.88 0.00
41_G 382_V 0.88 0.00
71_L 514_R 0.88 0.00
24_L 307_M 0.87 0.00
79_D 7_V 0.87 0.00
18_E 382_V 0.87 0.00
87_V 371_F 0.86 0.00
29_Y 351_E 0.86 0.00
26_D 205_L 0.86 0.00
20_L 381_A 0.86 0.00
61_L 374_N 0.85 0.00
84_D 315_K 0.85 0.00
82_Y 309_Q 0.85 0.00
82_Y 375_I 0.83 0.00
141_M 406_S 0.83 0.00
82_Y 371_F 0.83 0.00
67_P 414_E 0.83 0.00
54_F 299_A 0.82 0.00
114_E 144_G 0.82 0.00
40_R 468_I 0.82 0.00
37_Q 368_G 0.82 0.00
49_A 440_M 0.82 0.00
87_V 461_S 0.81 0.00
149_K 29_F 0.81 0.00
22_F 374_N 0.81 0.00
129_E 254_V 0.81 0.00
41_G 282_I 0.81 0.00
58_V 269_R 0.80 0.00
72_R 265_V 0.80 0.00
29_Y 287_T 0.80 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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