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OPENSEQ.org

YIDA - YIDP
UniProt: P0A8Y5 - P31453
Length: 508
Sequences: 357
Seq/Len: 0.71
I_Prob: 0.00

YIDA - Sugar phosphatase YidA
Paralog alert: 0.74 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: COF MPGP SUPH YBHA YBJI YIDA YIGL
YIDP - Uncharacterized HTH-type transcriptional regulator YidP
Paralog alert: 0.83 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: FRLR MNGR PHNF YEGW YIDP YIHL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
23_P 10_L 1.05 0.00
32_A 192_A 1.01 0.00
239_N 31_L 0.94 0.00
204_L 190_K 0.87 0.00
213_E 10_L 0.86 0.00
196_N 130_G 0.86 0.00
57_L 133_L 0.84 0.00
144_K 42_I 0.81 0.00
151_F 97_I 0.81 0.00
237_M 37_V 0.81 0.00
88_L 129_E 0.80 0.00
161_A 61_S 0.79 0.00
144_K 176_L 0.78 0.00
70_N 12_I 0.78 0.00
96_L 6_I 0.77 0.00
83_V 42_I 0.77 0.00
67_I 186_A 0.77 0.00
26_K 55_V 0.77 0.00
172_Q 10_L 0.76 0.00
225_I 159_E 0.76 0.00
81_S 145_F 0.75 0.00
41_L 48_L 0.75 0.00
225_I 45_A 0.75 0.00
151_F 57_R 0.74 0.00
231_A 153_L 0.74 0.00
80_G 3_Y 0.74 0.00
165_Q 96_L 0.73 0.00
96_L 176_L 0.72 0.00
58_H 46_I 0.71 0.00
228_I 71_L 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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