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OPENSEQ.org

NRDR - RISA
UniProt: P0A8D0 - P0AFU8
Length: 362
Sequences: 260
Seq/Len: 0.75
I_Prob: 0.00

NRDR - Transcriptional repressor NrdR
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: NRDR
RISA - Riboflavin synthase
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RISA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
60_P 143_D 1.40 0.00
24_S 61_F 1.30 0.00
89_N 109_V 1.26 0.00
51_V 6_V 1.20 0.00
112_V 68_L 1.20 0.00
35_N 161_L 1.17 0.00
73_A 44_H 1.16 0.00
25_V 162_I 1.16 0.00
122_V 94_I 1.14 0.00
61_F 157_F 1.12 0.00
38_F 199_L 1.08 0.00
24_S 162_I 1.07 0.00
79_V 161_L 1.04 0.00
7_F 69_R 1.03 0.00
25_V 91_S 1.03 0.00
8_A 6_V 1.03 0.00
127_F 44_H 1.03 0.00
111_L 82_V 0.99 0.00
46_L 105_T 0.99 0.00
78_P 118_N 0.98 0.00
85_E 86_R 0.97 0.00
108_I 110_A 0.96 0.00
73_A 33_L 0.96 0.00
5_F 21_F 0.95 0.00
96_R 91_S 0.95 0.00
69_G 168_R 0.95 0.00
103_V 27_E 0.95 0.00
108_I 26_V 0.94 0.00
90_H 171_L 0.94 0.00
143_E 87_A 0.94 0.00
108_I 151_E 0.94 0.00
132_R 106_T 0.94 0.00
88_I 114_T 0.93 0.00
12_K 133_Y 0.93 0.00
54_S 33_L 0.93 0.00
81_S 74_G 0.92 0.00
21_E 63_L 0.92 0.00
83_D 114_T 0.91 0.00
45_E 7_Q 0.90 0.00
45_E 93_E 0.90 0.00
103_V 56_G 0.89 0.00
103_V 119_R 0.89 0.00
121_K 120_Q 0.89 0.00
147_L 134_I 0.89 0.00
14_I 76_L 0.89 0.00
84_V 69_R 0.89 0.00
142_E 12_L 0.88 0.00
86_M 178_A 0.87 0.00
103_V 6_V 0.87 0.00
82_D 25_V 0.87 0.00
83_D 124_K 0.87 0.00
82_D 127_D 0.87 0.00
56_D 182_I 0.86 0.00
52_V 161_L 0.86 0.00
118_K 80_D 0.86 0.00
133_S 13_V 0.86 0.00
119_L 130_L 0.86 0.00
103_V 14_S 0.85 0.00
2_H 91_S 0.85 0.00
94_Q 24_H 0.85 0.00
5_F 36_L 0.85 0.00
56_D 125_V 0.85 0.00
82_D 173_K 0.84 0.00
32_L 108_E 0.84 0.00
86_M 140_I 0.84 0.00
141_G 107_A 0.84 0.00
14_I 7_Q 0.84 0.00
22_G 64_M 0.84 0.00
52_V 132_K 0.83 0.00
46_L 5_I 0.83 0.00
145_A 73_L 0.83 0.00
110_N 163_P 0.82 0.00
12_K 7_Q 0.82 0.00
137_I 87_A 0.82 0.00
47_V 159_V 0.82 0.00
140_F 139_F 0.82 0.00
22_G 119_R 0.82 0.00
54_S 191_V 0.82 0.00
125_I 94_I 0.82 0.00
132_R 118_N 0.82 0.00
105_S 91_S 0.81 0.00
36_E 171_L 0.81 0.00
103_V 91_S 0.81 0.00
88_I 92_D 0.81 0.00
16_S 112_I 0.81 0.00
145_A 53_E 0.81 0.00
5_F 64_M 0.81 0.00
25_V 15_I 0.81 0.00
58_R 43_A 0.80 0.00
148_E 127_D 0.80 0.00
127_F 24_H 0.80 0.00
99_G 182_I 0.80 0.00
69_G 162_I 0.80 0.00
140_F 150_G 0.80 0.00
80_S 93_E 0.79 0.00
32_L 17_E 0.79 0.00
14_I 93_E 0.79 0.00
12_K 44_H 0.79 0.00
57_V 67_T 0.78 0.00
8_A 154_P 0.78 0.00
111_L 45_N 0.78 0.00
45_E 40_A 0.78 0.00
85_E 7_Q 0.78 0.00
104_P 176_L 0.78 0.00
43_V 181_N 0.78 0.00
135_E 120_Q 0.78 0.00
69_G 7_Q 0.78 0.00
9_V 172_G 0.78 0.00
100_E 52_T 0.77 0.00
47_V 76_L 0.77 0.00
57_V 162_I 0.77 0.00
14_I 40_A 0.77 0.00
19_V 92_D 0.77 0.00
54_S 134_I 0.76 0.00
21_E 82_V 0.76 0.00
78_P 42_V 0.76 0.00
24_S 92_D 0.76 0.00
7_F 174_K 0.75 0.00
127_F 145_I 0.75 0.00
110_N 12_L 0.74 0.00
47_V 7_Q 0.74 0.00
25_V 159_V 0.74 0.00
88_I 110_A 0.74 0.00
70_M 13_V 0.74 0.00
60_P 159_V 0.74 0.00
101_R 43_A 0.74 0.00
48_M 93_E 0.73 0.00
103_V 71_T 0.73 0.00
10_D 7_Q 0.73 0.00
118_K 78_V 0.73 0.00
56_D 25_V 0.73 0.00
73_A 181_N 0.73 0.00
84_V 14_S 0.73 0.00
115_Q 165_T 0.73 0.00
84_V 82_V 0.73 0.00
136_D 90_F 0.73 0.00
75_E 49_L 0.73 0.00
110_N 51_V 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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