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OPENSEQ.org

TGT - YAJC
UniProt: P0A847 - P0ADZ7
Length: 485
Sequences: 378
Seq/Len: 0.79
I_Prob: 0.00

TGT - Queuine tRNA-ribosyltransferase
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: TGT
YAJC - UPF0092 membrane protein YajC
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YAJC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
68_E 54_D 1.36 0.00
116_N 89_T 1.19 0.00
99_G 34_F 1.11 0.00
205_I 50_K 1.10 0.00
157_R 75_V 1.08 0.00
341_L 72_V 1.07 0.00
322_N 53_M 1.03 0.00
167_K 75_V 1.00 0.00
116_N 92_V 0.99 0.00
332_I 90_E 0.93 0.00
191_Y 62_V 0.92 0.00
112_R 34_F 0.91 0.00
252_L 87_D 0.91 0.00
369_V 72_V 0.91 0.00
193_D 27_L 0.91 0.00
216_A 37_M 0.91 0.00
136_S 55_S 0.91 0.00
311_S 28_V 0.90 0.00
336_R 55_S 0.90 0.00
316_H 106_T 0.90 0.00
142_F 30_F 0.89 0.00
255_G 51_K 0.86 0.00
348_A 13_G 0.85 0.00
283_V 75_V 0.85 0.00
151_D 34_F 0.85 0.00
116_N 84_A 0.85 0.00
248_K 52_L 0.84 0.00
327_A 84_A 0.84 0.00
316_H 110_L 0.83 0.00
56_G 61_E 0.82 0.00
9_D 77_E 0.81 0.00
221_K 34_F 0.81 0.00
186_I 58_K 0.81 0.00
203_V 45_R 0.80 0.00
277_L 75_V 0.80 0.00
260_I 76_A 0.79 0.00
116_N 109_A 0.79 0.00
348_A 85_L 0.79 0.00
70_M 91_V 0.78 0.00
252_L 24_I 0.78 0.00
45_E 110_L 0.77 0.00
105_T 30_F 0.77 0.00
114_P 105_G 0.77 0.00
40_G 72_V 0.77 0.00
193_D 15_P 0.76 0.00
110_H 83_I 0.76 0.00
347_K 95_R 0.76 0.00
349_I 60_D 0.76 0.00
235_I 46_T 0.76 0.00
9_D 60_D 0.76 0.00
227_I 88_T 0.76 0.00
287_R 72_V 0.75 0.00
272_A 61_E 0.75 0.00
189_S 38_I 0.75 0.00
135_G 52_L 0.75 0.00
45_E 82_A 0.75 0.00
229_E 30_F 0.74 0.00
324_I 31_G 0.74 0.00
198_S 44_K 0.74 0.00
23_V 62_V 0.74 0.00
163_L 52_L 0.74 0.00
354_L 62_V 0.74 0.00
45_E 90_E 0.73 0.00
15_G 75_V 0.73 0.00
1_M 52_L 0.73 0.00
69_I 73_T 0.73 0.00
212_V 62_V 0.72 0.00
227_I 99_A 0.72 0.00
71_K 72_V 0.72 0.00
291_Y 58_K 0.72 0.00
311_S 71_R 0.72 0.00
139_V 4_F 0.72 0.00
301_E 15_P 0.72 0.00
44_E 101_V 0.72 0.00
205_I 34_F 0.71 0.00
287_R 86_N 0.71 0.00
158_S 59_G 0.71 0.00
299_D 83_I 0.71 0.00
344_G 32_L 0.71 0.00
114_P 103_P 0.71 0.00
260_I 26_M 0.71 0.00
177_G 11_A 0.71 0.00
347_K 16_A 0.70 0.00
107_Q 28_V 0.70 0.00
104_I 77_E 0.70 0.00
349_I 77_E 0.70 0.00
155_A 49_H 0.70 0.00
343_A 75_V 0.69 0.00
84_G 73_T 0.69 0.00
84_G 98_V 0.69 0.00
308_R 54_D 0.69 0.00
123_D 96_D 0.69 0.00
212_V 97_F 0.69 0.00
148_Y 42_Q 0.69 0.00
4_E 56_I 0.69 0.00
113_N 84_A 0.69 0.00
241_R 83_I 0.69 0.00
364_R 34_F 0.68 0.00
162_S 80_Y 0.68 0.00
275_G 59_G 0.68 0.00
269_T 42_Q 0.68 0.00
292_K 32_L 0.68 0.00
113_N 53_M 0.68 0.00
298_L 74_K 0.68 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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