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OPENSEQ.org

RUVA - RUVB
UniProt: P0A809 - P0A812
Length: 539
Sequences: 927
Seq/Len: 1.74
I_Prob: 0.99

RUVA - Holliday junction ATP-dependent DNA helicase RuvA
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RUVA
RUVB - Holliday junction ATP-dependent DNA helicase RuvB
Paralog alert: 0.13 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: RUVB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
176_E 93_K 2.59 0.99
102_V 11_G 1.37 0.70
102_V 192_I 1.23 0.56
81_V 75_V 1.17 0.49
193_T 75_V 1.14 0.46
200_R 42_E 1.13 0.45
108_G 135_L 1.13 0.45
116_I 212_V 1.10 0.42
33_T 320_A 1.10 0.41
180_M 119_S 1.08 0.40
176_E 32_V 1.08 0.39
124_L 193_V 1.07 0.38
58_Q 91_L 1.04 0.35
19_I 274_D 1.03 0.34
111_V 154_P 1.02 0.33
104_R 216_A 1.02 0.33
50_H 61_F 1.01 0.32
78_T 255_N 1.01 0.32
64_N 100_M 1.01 0.32
132_F 299_D 1.01 0.32
172_Y 311_L 1.01 0.31
162_E 183_F 1.00 0.30
101_A 23_I 0.99 0.29
49_T 200_M 0.99 0.29
162_E 297_I 0.98 0.29
84_K 99_A 0.98 0.28
162_E 264_M 0.97 0.28
20_E 180_R 0.97 0.28
15_P 168_T 0.97 0.28
169_A 137_I 0.97 0.27
19_I 16_E 0.96 0.26
131_R 316_R 0.96 0.26
114_P 140_G 0.96 0.26
85_L 149_K 0.95 0.25
129_K 70_T 0.94 0.25
22_G 243_S 0.94 0.24
54_R 315_P 0.93 0.23
36_Y 328_F 0.93 0.23
179_R 83_L 0.92 0.23
15_P 312_Q 0.92 0.23
47_V 158_I 0.91 0.22
116_I 324_A 0.91 0.22
126_V 130_M 0.90 0.21
22_G 311_L 0.89 0.21
20_E 72_A 0.89 0.20
4_R 301_L 0.89 0.20
113_L 149_K 0.89 0.20
161_Q 185_Q 0.89 0.20
95_A 285_N 0.89 0.20
177_A 29_E 0.89 0.20
120_T 137_I 0.88 0.20
126_V 224_N 0.88 0.19
172_Y 81_V 0.87 0.19
10_I 91_L 0.87 0.19
195_I 307_Q 0.87 0.19
69_R 276_F 0.86 0.18
84_K 79_M 0.86 0.18
53_V 287_A 0.86 0.18
76_I 294_R 0.86 0.18
129_K 242_I 0.86 0.18
21_V 100_M 0.86 0.18
102_V 206_D 0.86 0.18
43_Q 304_Y 0.86 0.18
130_D 20_D 0.86 0.18
9_I 237_K 0.85 0.17
84_K 140_G 0.85 0.17
43_Q 42_E 0.85 0.17
130_D 139_I 0.85 0.17
26_Y 139_I 0.85 0.17
49_T 168_T 0.85 0.17
124_L 91_L 0.85 0.17
116_I 274_D 0.85 0.17
66_K 42_E 0.85 0.17
174_P 222_I 0.85 0.17
112_K 46_K 0.85 0.17
124_L 138_M 0.84 0.17
87_L 99_A 0.84 0.17
17_V 193_V 0.84 0.17
105_E 15_P 0.84 0.16
181_V 322_T 0.84 0.16
124_L 208_G 0.84 0.16
124_L 22_A 0.84 0.16
118_K 32_V 0.84 0.16
127_E 154_P 0.83 0.16
127_E 142_G 0.83 0.16
175_Q 16_E 0.83 0.16
98_F 181_L 0.83 0.16
34_C 58_L 0.83 0.16
77_K 222_I 0.83 0.16
122_E 276_F 0.83 0.15
83_P 326_N 0.82 0.15
39_P 144_A 0.82 0.15
75_L 157_L 0.82 0.15
87_L 304_Y 0.82 0.15
33_T 311_L 0.82 0.15
189_A 93_K 0.82 0.15
47_V 15_P 0.82 0.15
112_K 330_I 0.82 0.15
37_E 201_G 0.81 0.14
52_V 40_Q 0.81 0.14
173_K 285_N 0.81 0.14
104_R 112_I 0.81 0.14
58_Q 306_I 0.81 0.14
68_E 97_L 0.80 0.14
54_R 288_A 0.80 0.14
119_K 276_F 0.80 0.14
114_P 28_L 0.80 0.14
77_K 285_N 0.80 0.13
23_G 99_A 0.79 0.13
112_K 310_F 0.79 0.13
190_S 274_D 0.79 0.13
110_L 293_E 0.79 0.13
179_R 130_M 0.79 0.13
49_T 300_V 0.79 0.13
90_L 75_V 0.79 0.13
112_K 85_T 0.78 0.13
78_T 4_A 0.78 0.12
197_E 202_L 0.78 0.12
3_G 183_F 0.78 0.12
183_K 158_I 0.78 0.12
201_A 53_D 0.78 0.12
113_L 147_S 0.78 0.12
128_M 231_R 0.78 0.12
162_E 85_T 0.78 0.12
181_V 299_D 0.78 0.12
105_E 270_L 0.78 0.12
71_L 224_N 0.78 0.12
131_R 179_Q 0.77 0.12
76_I 330_I 0.77 0.12
188_D 29_E 0.77 0.12
17_V 273_I 0.77 0.12
197_E 200_M 0.77 0.12
195_I 102_T 0.77 0.12
173_K 228_R 0.77 0.12
80_G 93_K 0.77 0.12
105_E 181_L 0.77 0.12
85_L 134_Q 0.77 0.12
33_T 295_E 0.77 0.12
30_M 275_K 0.77 0.12
188_D 193_V 0.77 0.12
176_E 28_L 0.77 0.12
46_I 204_M 0.77 0.12
6_R 216_A 0.76 0.12
120_T 276_F 0.76 0.12
172_Y 164_A 0.76 0.11
12_K 304_Y 0.76 0.11
185_A 192_I 0.76 0.11
30_M 40_Q 0.76 0.11
109_A 32_V 0.76 0.11
87_L 137_I 0.76 0.11
203_L 249_Q 0.76 0.11
36_Y 261_F 0.76 0.11
110_L 93_K 0.76 0.11
109_A 23_I 0.76 0.11
39_P 128_P 0.76 0.11
168_V 324_A 0.76 0.11
51_F 91_L 0.75 0.11
188_D 84_R 0.75 0.11
10_I 10_A 0.75 0.11
74_E 41_M 0.75 0.11
5_L 247_A 0.75 0.11
116_I 119_S 0.75 0.11
180_M 210_L 0.75 0.11
151_P 198_R 0.75 0.11
87_L 144_A 0.75 0.11
127_E 153_P 0.75 0.11
190_S 7_L 0.75 0.10
127_E 107_H 0.74 0.10
111_V 93_K 0.74 0.10
126_V 196_S 0.74 0.10
152_A 198_R 0.74 0.10
178_S 70_T 0.74 0.10
113_L 77_N 0.74 0.10
56_D 222_I 0.74 0.10
65_N 39_S 0.74 0.10
197_E 188_D 0.74 0.10
178_S 39_S 0.74 0.10
130_D 270_L 0.74 0.10
95_A 20_D 0.74 0.10
50_H 178_V 0.74 0.10
110_L 285_N 0.74 0.10
81_V 135_L 0.74 0.10
183_K 46_K 0.74 0.10
36_Y 31_Y 0.74 0.10
124_L 35_P 0.74 0.10
95_A 80_G 0.73 0.10
68_E 235_E 0.73 0.10
164_V 267_K 0.73 0.10
96_Q 75_V 0.73 0.10
94_S 138_M 0.73 0.10
162_E 73_N 0.73 0.10
164_V 93_K 0.73 0.10
107_V 178_V 0.73 0.10
172_Y 157_L 0.73 0.10
107_V 8_I 0.73 0.10
122_E 138_M 0.73 0.10
69_R 22_A 0.73 0.10
80_G 183_F 0.72 0.09
176_E 149_K 0.72 0.09
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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