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OPENSEQ.org

RNPA - YIDC
UniProt: P0A7Y8 - P25714
Length: 667
Sequences: 407
Seq/Len: 0.62
I_Prob: 0.00

RNPA - Ribonuclease P protein component
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RNPA
YIDC - Membrane protein insertase YidC
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YIDC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
30_T 417_V 1.23 0.00
85_F 317_M 1.21 0.00
23_Q 470_L 1.20 0.00
37_G 428_I 1.18 0.00
47_I 258_Q 1.14 0.00
88_V 263_A 1.14 0.00
53_K 89_K 1.12 0.00
21_V 492_Q 1.12 0.00
15_P 218_F 1.08 0.00
56_V 479_Q 1.08 0.00
90_K 250_G 1.08 0.00
35_I 288_Y 1.07 0.00
89_A 290_S 1.06 0.00
97_D 7_L 1.06 0.00
50_T 373_T 1.06 0.00
58_R 164_T 1.03 0.00
77_Q 510_P 1.02 0.00
18_F 331_G 1.02 0.00
112_H 77_G 1.01 0.00
60_H 361_I 1.01 0.00
93_V 153_Y 1.01 0.00
93_V 479_Q 1.00 0.00
49_L 335_F 1.00 0.00
72_S 359_I 0.99 0.00
107_K 417_V 0.99 0.00
73_F 506_F 0.99 0.00
87_V 4_Q 0.99 0.00
64_R 12_L 0.99 0.00
53_K 72_I 0.99 0.00
96_L 476_F 0.99 0.00
42_L 77_G 0.98 0.00
74_R 241_N 0.98 0.00
57_R 257_Q 0.97 0.00
71_E 511_S 0.97 0.00
87_V 247_S 0.97 0.00
27_R 480_K 0.97 0.00
34_T 417_V 0.97 0.00
111_R 420_L 0.96 0.00
30_T 484_T 0.96 0.00
114_R 297_P 0.94 0.00
43_G 85_P 0.94 0.00
53_K 381_A 0.93 0.00
25_P 524_T 0.93 0.00
66_K 277_A 0.93 0.00
16_S 501_I 0.93 0.00
50_T 256_L 0.93 0.00
52_A 446_L 0.92 0.00
66_K 369_M 0.92 0.00
49_L 502_F 0.92 0.00
98_N 230_Y 0.92 0.00
68_L 426_L 0.92 0.00
87_V 29_P 0.91 0.00
30_T 394_R 0.91 0.00
48_G 433_F 0.91 0.00
84_D 266_P 0.90 0.00
84_D 447_R 0.89 0.00
27_R 387_Q 0.89 0.00
34_T 470_L 0.88 0.00
52_A 354_W 0.88 0.00
118_G 36_T 0.88 0.00
65_I 440_L 0.88 0.00
40_N 389_K 0.88 0.00
92_G 162_T 0.87 0.00
41_S 452_A 0.87 0.00
76_R 466_I 0.87 0.00
76_R 132_N 0.87 0.00
48_G 463_P 0.87 0.00
100_A 237_T 0.87 0.00
28_A 184_G 0.87 0.00
13_L 237_T 0.87 0.00
30_T 382_K 0.87 0.00
48_G 488_D 0.86 0.00
47_I 277_A 0.86 0.00
53_K 163_K 0.86 0.00
50_T 438_Y 0.86 0.00
52_A 479_Q 0.86 0.00
95_D 393_M 0.86 0.00
103_E 176_V 0.85 0.00
89_A 405_S 0.85 0.00
52_A 498_M 0.85 0.00
50_T 199_S 0.85 0.00
50_T 374_K 0.85 0.00
38_R 347_I 0.85 0.00
32_Q 196_L 0.85 0.00
22_F 257_Q 0.85 0.00
59_A 100_L 0.85 0.00
48_G 182_N 0.84 0.00
27_R 460_A 0.84 0.00
85_F 163_K 0.84 0.00
30_T 180_V 0.84 0.00
37_G 240_D 0.84 0.00
39_L 356_F 0.84 0.00
51_V 357_S 0.83 0.00
111_R 262_T 0.83 0.00
68_L 137_A 0.83 0.00
50_T 451_F 0.83 0.00
87_V 477_F 0.83 0.00
112_H 340_L 0.83 0.00
17_Q 481_M 0.83 0.00
66_K 470_L 0.83 0.00
34_T 398_G 0.83 0.00
112_H 439_M 0.82 0.00
42_L 338_Q 0.82 0.00
100_A 401_K 0.82 0.00
50_T 3_S 0.82 0.00
111_R 497_F 0.82 0.00
34_T 386_L 0.82 0.00
86_V 477_F 0.82 0.00
25_P 338_Q 0.82 0.00
46_R 447_R 0.82 0.00
103_E 414_A 0.81 0.00
35_I 192_S 0.81 0.00
70_R 176_V 0.81 0.00
5_A 533_R 0.81 0.00
11_R 72_I 0.81 0.00
75_L 522_L 0.81 0.00
81_P 184_G 0.80 0.00
21_V 510_P 0.80 0.00
15_P 217_T 0.80 0.00
55_N 24_E 0.80 0.00
85_F 360_I 0.80 0.00
82_A 39_T 0.80 0.00
22_F 438_Y 0.80 0.00
17_Q 240_D 0.80 0.00
40_N 163_K 0.80 0.00
117_R 31_P 0.80 0.00
58_R 296_Q 0.80 0.00
17_Q 85_P 0.80 0.00
57_R 498_M 0.79 0.00
37_G 73_N 0.79 0.00
113_C 366_R 0.79 0.00
89_A 9_V 0.79 0.00
96_L 192_S 0.79 0.00
36_L 442_G 0.79 0.00
68_L 168_K 0.79 0.00
86_V 184_G 0.79 0.00
46_R 298_G 0.78 0.00
30_T 404_I 0.78 0.00
100_A 501_I 0.78 0.00
33_I 100_L 0.78 0.00
54_K 372_L 0.78 0.00
47_I 111_Q 0.78 0.00
54_K 291_Q 0.78 0.00
43_G 397_L 0.78 0.00
53_K 94_T 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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