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OPENSEQ.org

RIMM - TRMD
UniProt: P0A7X6 - P0A873
Length: 437
Sequences: 1087
Seq/Len: 2.64
I_Prob: 0.00

RIMM - Ribosome maturation factor RimM
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RIMM
TRMD - tRNA (guanine-N(1)-)-methyltransferase
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: TRMD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
153_E 63_M 0.96 0.00
103_E 7_S 0.92 0.00
31_V 122_V 0.90 0.00
31_V 148_L 0.82 0.00
131_M 169_D 0.81 0.00
108_W 62_M 0.80 0.00
110_D 24_R 0.79 0.00
80_R 67_L 0.78 0.00
139_L 114_R 0.77 0.00
86_L 1_M 0.76 0.00
139_L 144_P 0.74 0.00
41_I 187_L 0.74 0.00
133_T 90_Q 0.73 0.00
85_L 30_L 0.72 0.00
108_W 114_R 0.72 0.00
181_G 20_G 0.72 0.00
31_V 67_L 0.71 0.00
34_S 212_S 0.71 0.00
140_V 42_T 0.71 0.00
96_S 102_L 0.71 0.00
86_L 158_G 0.70 0.00
93_V 195_V 0.70 0.00
40_S 114_R 0.70 0.00
170_T 202_A 0.69 0.00
18_K 224_L 0.69 0.00
31_V 102_L 0.68 0.00
130_M 171_F 0.67 0.00
155_L 212_S 0.67 0.00
81_D 6_I 0.67 0.00
89_C 31_L 0.67 0.00
140_V 120_E 0.67 0.00
141_I 215_R 0.66 0.00
71_I 177_D 0.66 0.00
132_E 70_A 0.66 0.00
178_W 20_G 0.66 0.00
21_S 86_Y 0.65 0.00
26_R 155_F 0.65 0.00
44_Y 86_Y 0.65 0.00
111_L 88_S 0.64 0.00
37_D 62_M 0.64 0.00
43_D 210_K 0.64 0.00
31_V 128_D 0.64 0.00
153_E 88_S 0.64 0.00
164_I 61_L 0.64 0.00
16_L 100_S 0.63 0.00
51_K 148_L 0.63 0.00
158_F 114_R 0.63 0.00
161_G 28_N 0.63 0.00
89_C 155_F 0.63 0.00
47_W 38_P 0.62 0.00
26_R 103_A 0.62 0.00
151_I 61_L 0.62 0.00
181_G 96_Q 0.62 0.00
91_I 162_H 0.62 0.00
127_V 219_R 0.62 0.00
151_I 204_I 0.62 0.00
136_N 90_Q 0.61 0.00
48_F 5_I 0.61 0.00
133_T 215_R 0.61 0.00
74_L 162_H 0.61 0.00
152_K 85_I 0.61 0.00
47_W 20_G 0.60 0.00
107_Y 175_L 0.60 0.00
60_L 5_I 0.60 0.00
172_R 13_F 0.59 0.00
82_A 221_P 0.59 0.00
110_D 123_I 0.59 0.00
88_N 47_R 0.59 0.00
75_K 234_A 0.59 0.00
22_S 112_C 0.59 0.00
35_T 16_I 0.59 0.00
108_W 169_D 0.58 0.00
136_N 139_S 0.58 0.00
166_K 146_M 0.58 0.00
154_R 98_G 0.58 0.00
60_L 194_P 0.58 0.00
45_Q 136_Y 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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