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OPENSEQ.org

RS19 - SECY
UniProt: P0A7U3 - P0AGA2
Length: 535
Sequences: 892
Seq/Len: 1.71
I_Prob: 0.03

RS19 - 30S ribosomal protein S19
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RS19
SECY - Protein translocase subunit SecY
Paralog alert: 0.10 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SECY
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
26_G 24_L 1.30 0.03
53_N 160_A 1.27 0.03
30_P 431_S 1.27 0.03
62_V 420_V 1.27 0.03
62_V 51_K 1.26 0.03
57_H 128_A 1.25 0.03
76_P 416_F 1.22 0.02
39_T 413_I 1.21 0.02
53_N 156_F 1.21 0.02
44_M 62_E 1.17 0.02
5_L 76_S 1.16 0.02
45_I 123_G 1.15 0.02
59_P 332_Y 1.14 0.02
80_Y 132_S 1.12 0.02
37_R 380_Y 1.06 0.02
62_V 244_I 1.06 0.01
39_T 370_M 1.06 0.01
84_A 164_L 1.04 0.01
21_K 323_S 1.03 0.01
44_M 92_I 1.03 0.01
81_R 316_L 1.03 0.01
64_D 44_I 1.02 0.01
62_V 301_N 1.00 0.01
58_V 217_F 1.00 0.01
57_H 104_E 1.00 0.01
51_V 221_L 0.98 0.01
45_I 95_L 0.98 0.01
33_T 81_G 0.97 0.01
52_H 238_E 0.97 0.01
62_V 207_I 0.96 0.01
62_V 136_A 0.96 0.01
2_P 32_V 0.95 0.01
89_A 132_S 0.95 0.01
31_L 326_I 0.95 0.01
69_H 406_L 0.95 0.01
44_M 163_S 0.95 0.01
44_M 255_R 0.95 0.01
49_I 170_F 0.94 0.01
88_K 426_S 0.94 0.01
20_E 267_L 0.94 0.01
75_A 20_K 0.93 0.01
44_M 166_T 0.93 0.01
45_I 159_T 0.93 0.01
90_K 20_K 0.93 0.01
44_M 286_F 0.91 0.01
61_F 245_V 0.91 0.01
5_L 61_I 0.91 0.01
85_A 346_L 0.91 0.01
80_Y 82_I 0.91 0.01
57_H 52_L 0.90 0.01
19_V 39_I 0.90 0.01
59_P 173_W 0.89 0.01
53_N 399_F 0.89 0.01
88_K 409_V 0.89 0.01
63_T 82_I 0.89 0.01
55_R 330_F 0.88 0.01
18_K 335_L 0.88 0.01
52_H 37_S 0.88 0.01
26_G 60_I 0.88 0.01
62_V 115_K 0.88 0.01
26_G 202_A 0.88 0.01
45_I 125_L 0.87 0.01
19_V 368_K 0.86 0.01
62_V 237_V 0.85 0.01
45_I 284_I 0.85 0.01
21_K 257_V 0.85 0.01
84_A 366_I 0.85 0.01
50_A 78_F 0.85 0.01
25_S 288_A 0.85 0.01
57_H 318_V 0.85 0.01
86_D 37_S 0.84 0.01
45_I 373_L 0.84 0.01
37_R 76_S 0.84 0.01
37_R 277_A 0.84 0.01
18_K 136_A 0.83 0.01
49_I 269_V 0.83 0.01
44_M 130_F 0.83 0.01
45_I 148_L 0.83 0.01
81_R 30_L 0.83 0.01
45_I 233_F 0.83 0.01
44_M 41_I 0.82 0.01
25_S 320_L 0.82 0.01
88_K 239_R 0.82 0.01
45_I 102_L 0.82 0.01
81_R 301_N 0.82 0.01
40_I 418_A 0.82 0.01
49_I 179_T 0.82 0.01
52_H 220_L 0.81 0.01
62_V 155_A 0.81 0.01
19_V 119_Y 0.81 0.01
45_I 81_G 0.81 0.01
30_P 416_F 0.81 0.01
79_T 289_T 0.81 0.01
21_K 57_R 0.81 0.01
30_P 411_V 0.81 0.01
84_A 174_L 0.80 0.01
17_K 23_L 0.80 0.01
2_P 312_P 0.80 0.01
44_M 214_D 0.80 0.01
55_R 320_L 0.80 0.01
75_A 132_S 0.79 0.01
17_K 77_I 0.79 0.01
26_G 256_R 0.79 0.01
44_M 341_E 0.79 0.01
84_A 32_V 0.79 0.01
32_R 256_R 0.78 0.01
82_G 332_Y 0.78 0.01
20_E 235_V 0.78 0.01
24_E 66_M 0.78 0.01
59_P 22_R 0.77 0.01
62_V 229_A 0.77 0.01
44_M 243_R 0.77 0.01
55_R 137_T 0.77 0.01
34_W 359_G 0.77 0.01
21_K 41_I 0.77 0.01
57_H 437_N 0.77 0.01
44_M 353_V 0.77 0.01
79_T 114_R 0.77 0.01
53_N 87_S 0.77 0.01
31_L 277_A 0.77 0.01
57_H 420_V 0.76 0.01
21_K 228_F 0.76 0.01
33_T 37_S 0.76 0.01
88_K 111_S 0.76 0.01
76_P 26_V 0.76 0.01
86_D 238_E 0.76 0.01
10_F 80_L 0.75 0.01
44_M 413_I 0.75 0.01
24_E 55_Q 0.75 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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