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OPENSEQ.org

RL36 - RPOA
UniProt: P0A7Q6 - P0A7Z4
Length: 367
Sequences: 656
Seq/Len: 1.86
I_Prob: 0.03

RL36 - 50S ribosomal protein L36
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL362 RL36
RPOA - DNA-directed RNA polymerase subunit alpha
Paralog alert: 0.02 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RPOA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
18_K 181_E 1.25 0.03
16_I 113_A 1.18 0.02
31_P 213_P 1.11 0.02
31_P 81_I 1.08 0.02
21_G 311_G 1.06 0.02
17_V 99_I 1.05 0.01
36_R 129_V 1.05 0.01
32_K 260_L 1.01 0.01
36_R 12_R 0.99 0.01
9_K 173_V 0.99 0.01
18_K 186_N 0.98 0.01
16_I 169_G 0.98 0.01
10_L 230_A 0.98 0.01
13_N 195_R 0.95 0.01
16_I 241_E 0.95 0.01
18_K 22_T 0.94 0.01
36_R 220_A 0.91 0.01
18_K 57_T 0.91 0.01
18_K 295_L 0.89 0.01
10_L 46_I 0.87 0.01
32_K 306_V 0.85 0.01
22_V 224_L 0.84 0.01
25_V 18_Q 0.84 0.01
20_D 287_V 0.82 0.01
10_L 229_E 0.82 0.01
28_S 144_I 0.82 0.01
22_V 8_F 0.82 0.01
13_N 131_C 0.80 0.01
17_V 276_H 0.80 0.01
25_V 199_D 0.80 0.01
32_K 218_R 0.79 0.01
9_K 28_L 0.79 0.01
32_K 57_T 0.78 0.01
12_R 215_E 0.78 0.01
12_R 89_A 0.78 0.01
16_I 223_I 0.78 0.01
22_V 167_P 0.78 0.01
30_E 26_V 0.77 0.01
16_I 143_R 0.77 0.01
3_V 46_I 0.77 0.01
18_K 135_D 0.77 0.01
28_S 111_T 0.75 0.01
17_V 284_R 0.74 0.01
22_V 80_E 0.74 0.01
5_A 283_Q 0.74 0.01
18_K 240_P 0.74 0.01
5_A 97_E 0.73 0.01
32_K 46_I 0.73 0.01
24_R 62_D 0.72 0.01
31_P 136_E 0.72 0.01
23_I 94_G 0.72 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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