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OPENSEQ.org

RL34 - YIDC
UniProt: P0A7P5 - P25714
Length: 594
Sequences: 487
Seq/Len: 0.83
I_Prob: 0.00

RL34 - 50S ribosomal protein L34
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL34
YIDC - Membrane protein insertase YidC
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YIDC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
25_K 494_I 1.26 0.00
32_A 382_K 1.26 0.00
19_R 410_A 1.16 0.00
43_T 100_L 1.06 0.00
25_K 479_Q 1.05 0.00
26_N 201_T 1.02 0.00
30_V 176_V 1.00 0.00
40_A 395_E 0.98 0.00
31_L 226_P 0.97 0.00
5_F 193_F 0.97 0.00
20_A 295_V 0.97 0.00
23_A 498_M 0.96 0.00
40_A 73_N 0.96 0.00
15_S 320_V 0.96 0.00
30_V 511_S 0.96 0.00
41_R 519_V 0.95 0.00
30_V 365_V 0.94 0.00
23_A 319_A 0.93 0.00
31_L 181_Q 0.93 0.00
19_R 497_F 0.91 0.00
40_A 394_R 0.91 0.00
19_R 266_P 0.91 0.00
5_F 281_N 0.90 0.00
33_R 290_S 0.88 0.00
14_R 415_E 0.88 0.00
33_R 193_F 0.88 0.00
13_N 342_K 0.87 0.00
28_R 332_W 0.86 0.00
5_F 194_G 0.86 0.00
36_A 526_I 0.86 0.00
31_L 19_I 0.86 0.00
9_V 336_I 0.85 0.00
26_N 485_T 0.84 0.00
33_R 284_A 0.84 0.00
20_A 12_L 0.84 0.00
19_R 492_Q 0.83 0.00
33_R 288_Y 0.83 0.00
20_A 350_F 0.82 0.00
26_N 165_F 0.82 0.00
5_F 112_S 0.81 0.00
20_A 164_T 0.81 0.00
43_T 387_Q 0.80 0.00
19_R 312_E 0.80 0.00
31_L 149_V 0.79 0.00
9_V 537_K 0.79 0.00
33_R 171_D 0.79 0.00
23_A 215_L 0.79 0.00
14_R 463_P 0.78 0.00
5_F 88_P 0.78 0.00
36_A 348_H 0.78 0.00
31_L 106_F 0.78 0.00
32_A 501_I 0.78 0.00
26_N 292_P 0.77 0.00
20_A 492_Q 0.77 0.00
13_N 143_G 0.77 0.00
43_T 474_T 0.77 0.00
5_F 205_H 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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