May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
RL33 - SLMA
UniProt: P0A7N9 - P0C093
Length: 253
Sequences: 254
Seq/Len: 1.03
I_Prob: 0.03
RL33 - 50S ribosomal protein L33
Paralog alert: 0.20 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL33 		SLMA - Nucleoid occlusion factor SlmA
Paralog alert: 0.84 [within 20: 0.25] - ratio of genomes with paralogs
Cluster includes: ACRR BDCR BETI COMR ENVR NEMR RUTR SLMA UIDR YBIH YBJK YJDC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
39_F 97_G 1.52 0.03
34_L 194_A 1.05 0.01
29_T 188_A 1.05 0.01
34_L 97_G 1.03 0.01
32_E 166_C 1.03 0.01
10_K 165_F 1.01 0.01
24_T 122_Q 1.00 0.01
30_K 150_G 0.99 0.01
39_F 175_R 0.96 0.01
31_P 121_L 0.93 0.01
14_S 170_L 0.93 0.01
49_Y 127_Q 0.91 0.01
32_E 151_Y 0.89 0.01
45_Q 80_D 0.88 0.00
11_L 154_D 0.86 0.00
39_F 71_I 0.85 0.00
39_F 40_S 0.85 0.00
32_E 128_L 0.85 0.00
30_K 88_L 0.84 0.00
34_L 139_V 0.84 0.00
11_L 150_G 0.83 0.00
11_L 196_Q 0.82 0.00
34_L 72_T 0.81 0.00
11_L 193_I 0.81 0.00
45_Q 188_A 0.80 0.00
45_Q 57_R 0.80 0.00
32_E 30_Q 0.80 0.00
24_T 76_L 0.79 0.00
5_I 12_R 0.79 0.00
19_H 127_Q 0.78 0.00
32_E 154_D 0.78 0.00
27_K 77_I 0.77 0.00
28_R 191_P 0.76 0.00
15_A 44_S 0.76 0.00
14_S 191_P 0.76 0.00
32_E 159_A 0.75 0.00
15_A 43_V 0.74 0.00
10_K 157_L 0.74 0.00
43_V 51_H 0.74 0.00
34_L 108_I 0.74 0.00
32_E 194_A 0.73 0.00
16_G 18_S 0.73 0.00
39_F 33_T 0.73 0.00
50_K 101_R 0.73 0.00
30_K 151_Y 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 0.0844 seconds.