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OPENSEQ.org

RL10 - SECE
UniProt: P0A7J3 - P0AG96
Length: 292
Sequences: 235
Seq/Len: 0.81
I_Prob: 0.01

RL10 - 50S ribosomal protein L10
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL10
SECE - Preprotein translocase subunit SecE
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SECE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
76_F 34_Y 1.56 0.01
27_V 72_A 1.31 0.01
68_P 58_V 1.29 0.01
10_A 81_K 1.29 0.01
56_R 19_W 1.24 0.01
29_D 19_W 1.22 0.01
61_R 34_Y 1.21 0.01
129_L 62_T 1.18 0.01
100_A 27_L 1.18 0.01
56_R 22_V 1.17 0.01
4_N 43_L 1.16 0.01
27_V 68_T 1.15 0.00
103_N 102_A 1.14 0.00
74_D 79_V 1.14 0.00
29_D 33_N 1.14 0.00
154_T 93_T 1.11 0.00
26_V 75_A 1.10 0.00
27_V 25_L 1.09 0.00
117_L 54_A 1.08 0.00
105_K 103_V 1.07 0.00
3_L 73_R 1.07 0.00
96_F 19_W 1.06 0.00
133_E 17_M 1.05 0.00
155_L 99_A 1.05 0.00
56_R 33_N 1.05 0.00
38_M 96_I 1.04 0.00
137_A 48_V 1.04 0.00
124_D 93_T 1.01 0.00
95_L 86_T 1.01 0.00
129_L 120_S 1.00 0.00
161_A 18_K 0.99 0.00
98_E 63_T 0.99 0.00
67_T 97_V 0.98 0.00
162_K 79_V 0.98 0.00
43_K 74_E 0.97 0.00
80_T 33_N 0.96 0.00
133_E 83_I 0.96 0.00
132_Y 105_S 0.95 0.00
83_A 121_F 0.95 0.00
151_L 69_V 0.94 0.00
45_G 15_E 0.93 0.00
56_R 29_A 0.93 0.00
46_R 97_V 0.93 0.00
67_T 2_S 0.92 0.00
9_Q 42_P 0.92 0.00
4_N 34_Y 0.92 0.00
76_F 76_R 0.91 0.00
142_T 101_T 0.90 0.00
142_T 69_V 0.90 0.00
105_K 6_E 0.90 0.00
39_T 32_G 0.89 0.00
128_T 63_T 0.89 0.00
161_A 30_I 0.89 0.00
100_A 86_T 0.87 0.00
145_E 79_V 0.87 0.00
108_V 38_D 0.87 0.00
92_A 15_E 0.87 0.00
70_E 29_A 0.86 0.00
86_M 103_V 0.85 0.00
16_S 81_K 0.85 0.00
11_I 55_A 0.84 0.00
94_R 76_R 0.84 0.00
155_L 54_A 0.84 0.00
91_A 29_A 0.84 0.00
43_K 29_A 0.84 0.00
15_V 42_P 0.84 0.00
135_A 76_R 0.84 0.00
87_E 17_M 0.83 0.00
25_A 119_V 0.83 0.00
56_R 110_G 0.83 0.00
56_R 107_I 0.83 0.00
66_G 66_K 0.83 0.00
155_L 35_L 0.82 0.00
6_Q 61_L 0.82 0.00
151_L 76_R 0.82 0.00
52_M 117_R 0.82 0.00
47_E 49_V 0.82 0.00
141_A 125_L 0.82 0.00
31_R 83_I 0.82 0.00
88_H 100_V 0.82 0.00
13_A 57_G 0.82 0.00
53_R 37_R 0.81 0.00
47_E 70_A 0.81 0.00
143_M 57_G 0.81 0.00
104_A 99_A 0.81 0.00
69_F 58_V 0.81 0.00
36_D 105_S 0.81 0.00
29_D 71_F 0.81 0.00
58_T 88_Q 0.81 0.00
143_M 41_L 0.81 0.00
106_F 118_L 0.81 0.00
13_A 103_V 0.80 0.00
83_A 17_M 0.80 0.00
64_V 28_V 0.80 0.00
29_D 22_V 0.80 0.00
61_R 42_P 0.80 0.00
119_P 104_M 0.80 0.00
47_E 75_A 0.80 0.00
122_Q 98_A 0.79 0.00
126_L 60_L 0.79 0.00
51_Y 75_A 0.79 0.00
11_I 96_I 0.79 0.00
95_L 49_V 0.79 0.00
153_R 24_A 0.78 0.00
76_F 1_M 0.78 0.00
90_G 80_R 0.78 0.00
96_F 83_I 0.78 0.00
113_F 32_G 0.78 0.00
87_E 61_L 0.78 0.00
9_Q 74_E 0.78 0.00
26_V 32_G 0.78 0.00
4_N 41_L 0.78 0.00
45_G 83_I 0.78 0.00
92_A 75_A 0.78 0.00
136_I 104_M 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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