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OPENSEQ.org

RBFA - RIBF
UniProt: P0A7G2 - P0AG40
Length: 446
Sequences: 520
Seq/Len: 1.22
I_Prob: 0.08

RBFA - Ribosome-binding factor A
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RBFA
RIBF - Riboflavin biosynthesis protein RibF
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RIBF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
48_A 35_L 1.52 0.08
83_L 261_L 1.39 0.06
7_R 58_Q 1.29 0.04
58_N 135_G 1.26 0.04
79_I 126_D 1.23 0.04
44_S 246_R 1.20 0.03
39_S 249_V 1.20 0.03
53_Y 140_L 1.16 0.03
85_K 33_R 1.13 0.03
98_F 5_R 1.09 0.02
62_E 17_G 1.06 0.02
51_K 169_V 1.05 0.02
48_A 126_D 1.04 0.02
77_G 133_R 1.03 0.02
23_L 295_Q 1.00 0.02
73_Q 121_L 0.96 0.01
79_I 82_L 0.96 0.01
92_V 172_A 0.95 0.01
83_L 133_R 0.93 0.01
52_V 266_D 0.92 0.01
48_A 173_L 0.92 0.01
110_S 246_R 0.89 0.01
39_S 43_G 0.88 0.01
53_Y 19_V 0.87 0.01
27_I 117_R 0.86 0.01
54_V 242_N 0.86 0.01
37_T 73_T 0.86 0.01
7_R 24_N 0.85 0.01
39_S 276_L 0.85 0.01
11_V 256_L 0.85 0.01
79_I 219_S 0.85 0.01
60_K 65_T 0.84 0.01
49_Y 126_D 0.84 0.01
11_V 140_L 0.84 0.01
91_I 126_D 0.84 0.01
23_L 250_A 0.83 0.01
116_V 116_L 0.83 0.01
38_V 76_R 0.82 0.01
37_T 100_A 0.82 0.01
84_G 249_V 0.82 0.01
43_M 36_L 0.81 0.01
95_L 153_S 0.81 0.01
45_R 201_L 0.81 0.01
95_L 44_R 0.81 0.01
109_M 35_L 0.81 0.01
19_I 279_K 0.81 0.01
71_A 101_A 0.81 0.01
44_S 227_V 0.80 0.01
28_K 135_G 0.80 0.01
79_I 300_E 0.80 0.01
15_M 20_L 0.80 0.01
49_Y 35_L 0.80 0.01
18_E 22_I 0.79 0.01
16_Q 63_F 0.79 0.01
68_G 239_G 0.79 0.01
23_L 82_L 0.79 0.01
23_L 87_V 0.79 0.01
50_A 58_Q 0.78 0.01
38_V 82_L 0.78 0.01
74_E 136_D 0.77 0.01
71_A 81_Y 0.77 0.01
56_F 296_I 0.77 0.01
34_M 118_V 0.77 0.01
90_R 55_F 0.77 0.01
37_T 35_L 0.77 0.01
25_R 274_V 0.77 0.01
98_F 276_L 0.77 0.01
51_K 129_F 0.77 0.01
53_Y 237_L 0.76 0.01
64_A 259_H 0.76 0.01
105_E 24_N 0.76 0.01
95_L 172_A 0.76 0.01
62_E 34_A 0.76 0.01
56_F 256_L 0.76 0.01
42_E 219_S 0.76 0.01
94_E 263_V 0.75 0.01
11_V 121_L 0.75 0.01
47_L 21_T 0.75 0.01
88_R 217_Q 0.74 0.01
52_V 60_L 0.74 0.01
27_I 56_E 0.74 0.01
74_E 276_L 0.74 0.01
23_L 28_V 0.74 0.01
33_G 199_D 0.74 0.01
101_N 37_Q 0.74 0.01
113_V 306_F 0.74 0.01
118_K 288_S 0.73 0.01
20_A 56_E 0.73 0.01
14_E 118_V 0.73 0.01
44_S 300_E 0.73 0.01
58_N 247_P 0.73 0.01
51_K 122_A 0.73 0.01
90_R 247_P 0.73 0.01
13_Q 82_L 0.73 0.01
44_S 160_G 0.73 0.01
13_Q 21_T 0.72 0.01
66_K 96_D 0.72 0.01
82_L 164_I 0.72 0.01
114_T 277_R 0.72 0.01
78_F 262_D 0.72 0.01
12_A 57_P 0.72 0.01
77_G 210_A 0.71 0.01
65_V 119_K 0.71 0.01
32_L 133_R 0.71 0.01
74_E 78_K 0.71 0.01
115_S 283_E 0.71 0.01
37_T 59_P 0.71 0.01
113_V 249_V 0.71 0.01
16_Q 187_H 0.71 0.01
47_L 122_A 0.71 0.01
53_Y 262_D 0.70 0.01
16_Q 82_L 0.70 0.01
53_Y 167_T 0.70 0.01
11_V 81_Y 0.70 0.01
49_Y 201_L 0.70 0.01
61_D 169_V 0.70 0.01
83_L 22_I 0.70 0.01
26_E 104_A 0.70 0.01
16_Q 22_I 0.70 0.01
40_G 260_L 0.69 0.01
37_T 280_I 0.69 0.01
30_P 88_D 0.69 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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