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OPENSEQ.org

PYRB - PYRC
UniProt: P0A786 - P05020
Length: 659
Sequences: 939
Seq/Len: 1.48
I_Prob: 0.00

PYRB - Aspartate carbamoyltransferase catalytic chain
Paralog alert: 0.85 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: OTC1 OTC2 PYRB YGEW
PYRC - Dihydroorotase
Paralog alert: 0.46 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: PYRC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
191_D 132_K 1.13 0.00
220_M 203_H 1.08 0.00
251_R 264_C 0.97 0.00
191_D 127_L 0.95 0.00
193_L 222_C 0.87 0.00
137_T 141_G 0.87 0.00
57_R 38_G 0.86 0.00
164_L 59_Y 0.85 0.00
76_D 188_V 0.81 0.00
72_V 174_V 0.80 0.00
191_D 131_E 0.80 0.00
260_A 324_E 0.79 0.00
180_F 199_I 0.79 0.00
28_A 181_T 0.79 0.00
180_F 137_L 0.79 0.00
192_A 129_R 0.78 0.00
292_N 255_H 0.78 0.00
226_L 31_P 0.77 0.00
191_D 174_V 0.77 0.00
149_T 142_E 0.77 0.00
146_I 336_F 0.77 0.00
158_V 14_D 0.77 0.00
189_A 320_Q 0.76 0.00
115_L 128_E 0.75 0.00
231_V 332_T 0.75 0.00
222_E 31_P 0.75 0.00
261_N 210_H 0.74 0.00
304_V 174_V 0.74 0.00
292_N 184_A 0.74 0.00
227_Y 301_P 0.74 0.00
58_L 28_T 0.74 0.00
62_T 143_V 0.73 0.00
253_S 319_E 0.73 0.00
261_N 119_S 0.73 0.00
223_V 294_A 0.73 0.00
149_T 315_L 0.73 0.00
239_S 187_Y 0.73 0.00
90_A 261_E 0.73 0.00
100_V 282_V 0.72 0.00
249_V 77_M 0.72 0.00
248_F 132_K 0.72 0.00
88_T 262_S 0.72 0.00
153_L 31_P 0.71 0.00
31_L 235_L 0.71 0.00
79_N 32_Y 0.71 0.00
59_S 29_V 0.71 0.00
127_N 335_P 0.70 0.00
158_V 210_H 0.70 0.00
271_V 133_I 0.70 0.00
8_K 16_W 0.70 0.00
283_H 71_H 0.70 0.00
296_A 315_L 0.70 0.00
226_L 305_G 0.70 0.00
59_S 17_H 0.70 0.00
305_L 14_D 0.69 0.00
248_F 298_V 0.69 0.00
221_A 290_Q 0.69 0.00
214_S 131_E 0.69 0.00
153_L 57_V 0.69 0.00
187_F 208_R 0.69 0.00
218_E 238_L 0.69 0.00
155_N 281_T 0.68 0.00
256_H 297_S 0.68 0.00
248_F 156_R 0.68 0.00
300_L 66_A 0.68 0.00
256_H 230_I 0.68 0.00
159_A 286_M 0.68 0.00
231_V 314_E 0.68 0.00
276_T 258_H 0.68 0.00
25_L 269_C 0.68 0.00
72_V 205_M 0.68 0.00
268_L 216_V 0.68 0.00
101_D 14_D 0.67 0.00
226_L 103_K 0.67 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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