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OPENSEQ.org

NUSB - RIBB
UniProt: P0A780 - P0A7J0
Length: 356
Sequences: 382
Seq/Len: 1.13
I_Prob: 0.14

NUSB - N utilization substance protein B
Paralog alert: 0.76 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: NUSB
RIBB - 3,4-dihydroxy-2-butanone 4-phosphate synthase
Paralog alert: 0.14 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RIBB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
84_V 175_L 1.61 0.14
18_Y 106_T 1.18 0.04
46_L 196_N 1.17 0.04
44_D 153_H 1.09 0.03
122_F 48_E 1.04 0.03
116_A 185_A 1.04 0.03
44_D 156_A 1.01 0.02
48_F 200_V 0.98 0.02
8_R 131_L 0.98 0.02
126_V 79_D 0.97 0.02
39_D 48_E 0.97 0.02
66_M 206_V 0.97 0.02
72_R 156_A 0.97 0.02
117_E 43_M 0.95 0.02
133_V 20_L 0.95 0.02
62_L 183_A 0.94 0.02
84_V 112_A 0.94 0.02
105_N 180_G 0.93 0.02
62_L 48_E 0.92 0.02
63_D 140_L 0.89 0.01
47_Y 94_G 0.88 0.01
62_L 173_C 0.88 0.01
82_K 212_H 0.87 0.01
41_K 192_A 0.87 0.01
98_V 178_D 0.87 0.01
99_P 208_Y 0.86 0.01
17_L 61_H 0.86 0.01
19_S 59_I 0.86 0.01
106_E 180_G 0.86 0.01
99_P 179_D 0.85 0.01
120_H 102_A 0.85 0.01
57_T 166_F 0.84 0.01
121_K 153_H 0.84 0.01
112_K 102_A 0.83 0.01
14_V 13_F 0.83 0.01
85_L 201_T 0.82 0.01
25_N 178_D 0.82 0.01
109_E 51_T 0.82 0.01
113_S 128_P 0.82 0.01
96_S 82_M 0.82 0.01
50_E 81_P 0.82 0.01
98_V 61_H 0.82 0.01
131_A 171_V 0.81 0.01
136_P 137_V 0.81 0.01
123_V 99_I 0.81 0.01
122_F 133_R 0.81 0.01
108_I 197_M 0.81 0.01
74_L 79_D 0.80 0.01
24_Q 84_V 0.80 0.01
45_V 81_P 0.80 0.01
87_I 23_L 0.80 0.01
86_R 34_D 0.80 0.01
78_G 173_C 0.80 0.01
78_G 162_T 0.79 0.01
11_E 178_D 0.79 0.01
136_P 94_G 0.79 0.01
103_A 60_R 0.78 0.01
48_F 19_A 0.78 0.01
87_I 79_D 0.78 0.01
84_V 70_I 0.78 0.01
107_A 52_V 0.78 0.01
62_L 59_I 0.78 0.01
51_L 119_R 0.76 0.01
128_D 121_A 0.76 0.01
83_A 153_H 0.76 0.01
113_S 144_A 0.76 0.01
85_L 197_M 0.76 0.01
116_A 34_D 0.76 0.01
78_G 185_A 0.76 0.01
99_P 118_V 0.76 0.01
11_E 144_A 0.75 0.01
29_D 52_V 0.75 0.01
99_P 180_G 0.75 0.01
11_E 173_C 0.75 0.01
134_I 85_E 0.74 0.01
123_V 181_T 0.74 0.01
38_Q 62_G 0.74 0.01
14_V 131_L 0.73 0.01
11_E 185_A 0.73 0.01
13_A 196_N 0.73 0.01
9_A 192_A 0.73 0.01
7_R 79_D 0.73 0.01
39_D 196_N 0.73 0.01
92_L 163_L 0.73 0.01
108_I 29_V 0.73 0.01
98_V 27_R 0.72 0.01
7_R 92_G 0.72 0.01
103_A 23_L 0.72 0.01
39_D 60_R 0.72 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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