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RNFA - RNFD
UniProt: P0A766 - P76182
Length: 545
Sequences: 751
Seq/Len: 1.46
I_Prob: 0.02

RNFA - Electron transport complex protein RnfA
Paralog alert: 0.97 [within 20: 0.70] - ratio of genomes with paralogs
Cluster includes: RNFA RNFE
RNFD - Electron transport complex protein RnfD
Paralog alert: 0.32 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RNFD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
43_L 116_L 1.34 0.02
33_K 311_V 1.16 0.01
151_F 184_S 1.09 0.01
44_A 89_I 1.08 0.01
124_I 126_I 1.05 0.01
58_L 250_V 1.02 0.01
45_T 88_S 0.98 0.01
46_T 43_T 0.98 0.01
147_V 292_T 0.97 0.01
47_F 44_L 0.97 0.01
138_F 37_W 0.96 0.01
107_L 335_V 0.94 0.01
128_H 338_I 0.93 0.01
56_A 209_P 0.92 0.01
106_F 314_I 0.92 0.01
152_A 89_I 0.91 0.01
132_Q 246_L 0.90 0.01
39_M 229_A 0.89 0.01
124_I 343_R 0.88 0.01
99_L 284_F 0.87 0.01
147_V 232_V 0.86 0.01
140_A 135_F 0.86 0.01
129_N 233_W 0.86 0.01
44_A 270_P 0.86 0.01
115_A 323_G 0.85 0.01
38_A 276_S 0.84 0.01
61_T 250_V 0.84 0.01
31_V 91_P 0.82 0.01
47_F 47_I 0.82 0.01
47_F 250_V 0.82 0.01
14_V 309_L 0.82 0.01
106_F 320_Y 0.81 0.01
154_I 26_L 0.81 0.01
152_A 338_I 0.80 0.01
90_M 211_Y 0.80 0.01
118_G 304_G 0.80 0.01
158_L 303_F 0.80 0.01
58_L 52_V 0.80 0.01
52_A 100_L 0.80 0.01
58_L 55_L 0.79 0.01
56_A 303_F 0.78 0.00
34_K 201_S 0.78 0.00
157_R 80_L 0.78 0.00
23_L 327_A 0.77 0.00
35_L 292_T 0.77 0.00
113_N 113_Y 0.77 0.00
87_F 303_F 0.76 0.00
52_A 25_L 0.76 0.00
56_A 232_V 0.76 0.00
33_K 108_I 0.76 0.00
154_I 292_T 0.76 0.00
56_A 91_P 0.75 0.00
32_S 169_S 0.75 0.00
91_V 206_M 0.74 0.00
72_L 303_F 0.74 0.00
22_F 91_P 0.74 0.00
40_G 133_I 0.74 0.00
8_F 210_I 0.74 0.00
154_I 120_P 0.74 0.00
83_V 67_Q 0.74 0.00
30_G 137_V 0.73 0.00
58_L 312_W 0.73 0.00
120_A 101_G 0.73 0.00
118_G 17_T 0.73 0.00
63_I 287_L 0.73 0.00
28_F 347_Y 0.73 0.00
72_L 327_A 0.73 0.00
147_V 237_Q 0.73 0.00
92_V 108_I 0.73 0.00
45_T 132_L 0.73 0.00
105_I 281_L 0.72 0.00
132_Q 184_S 0.72 0.00
124_I 331_A 0.72 0.00
129_N 302_I 0.72 0.00
80_V 29_V 0.72 0.00
53_S 338_I 0.71 0.00
22_F 251_T 0.71 0.00
49_M 10_Y 0.71 0.00
59_I 333_I 0.71 0.00
62_W 294_S 0.71 0.00
31_V 182_G 0.71 0.00
91_V 17_T 0.71 0.00
93_R 138_Q 0.71 0.00
13_L 229_A 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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