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OPENSEQ.org

LPXA - LPXB
UniProt: P0A722 - P10441
Length: 644
Sequences: 531
Seq/Len: 0.84
I_Prob: 0.00

LPXA - Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
Paralog alert: 0.60 [within 20: 0.54] - ratio of genomes with paralogs
Cluster includes: LPXA
LPXB - Lipid-A-disaccharide synthase
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: LPXB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
215_I 9_I 1.17 0.00
124_A 68_V 1.13 0.00
117_L 270_A 1.08 0.00
175_S 56_E 1.06 0.00
13_I 256_L 1.04 0.00
72_N 158_N 1.02 0.00
210_E 219_L 1.00 0.00
142_A 36_A 0.99 0.00
175_S 23_A 0.98 0.00
113_S 35_N 0.97 0.00
216_R 272_L 0.97 0.00
9_H 146_F 0.97 0.00
21_G 219_L 0.96 0.00
248_A 99_A 0.95 0.00
135_L 268_S 0.95 0.00
35_H 328_L 0.95 0.00
119_I 365_I 0.95 0.00
151_A 84_K 0.95 0.00
171_V 71_R 0.91 0.00
151_A 314_L 0.90 0.00
165_I 340_A 0.90 0.00
149_D 127_A 0.89 0.00
20_I 365_I 0.89 0.00
184_Y 90_K 0.89 0.00
142_A 14_G 0.89 0.00
100_R 369_A 0.88 0.00
73_Q 68_V 0.87 0.00
126_D 12_V 0.87 0.00
205_R 231_P 0.86 0.00
181_V 145_A 0.86 0.00
127_C 146_F 0.85 0.00
215_I 332_C 0.85 0.00
231_E 360_E 0.85 0.00
124_A 334_P 0.85 0.00
169_V 142_L 0.85 0.00
79_G 212_F 0.84 0.00
203_K 22_G 0.84 0.00
107_G 13_A 0.84 0.00
58_R 338_A 0.83 0.00
258_R 284_L 0.83 0.00
152_I 97_I 0.83 0.00
239_L 111_K 0.83 0.00
22_A 217_Q 0.83 0.00
44_L 161_C 0.83 0.00
181_V 133_V 0.82 0.00
159_V 340_A 0.82 0.00
123_I 338_A 0.82 0.00
162_F 147_L 0.82 0.00
100_R 170_D 0.82 0.00
142_A 135_K 0.81 0.00
158_A 203_A 0.81 0.00
147_V 23_A 0.81 0.00
169_V 69_L 0.81 0.00
151_A 106_L 0.80 0.00
124_A 86_F 0.80 0.00
129_V 232_L 0.80 0.00
35_H 323_L 0.80 0.00
222_I 228_I 0.79 0.00
197_V 337_L 0.79 0.00
100_R 313_S 0.79 0.00
203_K 97_I 0.78 0.00
244_P 215_T 0.78 0.00
46_S 57_M 0.78 0.00
111_V 378_L 0.78 0.00
168_H 12_V 0.78 0.00
68_I 93_V 0.78 0.00
178_A 278_A 0.78 0.00
34_P 32_H 0.77 0.00
78_A 278_A 0.77 0.00
188_Q 41_V 0.77 0.00
44_L 90_K 0.77 0.00
236_I 225_D 0.77 0.00
249_F 103_N 0.76 0.00
135_L 314_L 0.76 0.00
136_A 232_L 0.76 0.00
67_S 211_D 0.76 0.00
99_H 93_V 0.76 0.00
173_G 284_L 0.76 0.00
133_C 110_L 0.76 0.00
163_C 160_P 0.76 0.00
14_V 218_L 0.76 0.00
219_Y 169_A 0.75 0.00
172_G 232_L 0.75 0.00
159_V 103_N 0.75 0.00
75_L 169_A 0.75 0.00
28_P 260_M 0.75 0.00
96_V 286_K 0.75 0.00
169_V 295_M 0.74 0.00
136_A 295_M 0.74 0.00
20_I 247_E 0.74 0.00
76_K 14_G 0.74 0.00
55_K 93_V 0.74 0.00
187_A 205_V 0.74 0.00
48_V 28_A 0.74 0.00
121_A 309_T 0.74 0.00
197_V 22_G 0.74 0.00
20_I 320_G 0.73 0.00
16_E 48_A 0.73 0.00
139_A 131_K 0.73 0.00
90_N 267_A 0.73 0.00
172_G 241_F 0.73 0.00
236_I 195_A 0.73 0.00
99_H 151_K 0.73 0.00
219_Y 122_S 0.72 0.00
28_P 137_G 0.72 0.00
262_R 114_G 0.72 0.00
135_L 295_M 0.72 0.00
56_I 44_P 0.72 0.00
242_T 344_L 0.72 0.00
120_N 284_L 0.72 0.00
10_P 224_P 0.72 0.00
101_G 61_A 0.72 0.00
26_I 220_R 0.72 0.00
175_S 146_F 0.72 0.00
205_R 87_G 0.71 0.00
26_I 225_D 0.71 0.00
26_I 342_L 0.71 0.00
157_T 278_A 0.71 0.00
116_L 291_V 0.71 0.00
14_V 13_A 0.71 0.00
20_I 305_R 0.71 0.00
63_Y 54_W 0.71 0.00
25_H 111_K 0.71 0.00
55_K 30_K 0.71 0.00
116_L 63_M 0.71 0.00
235_E 298_F 0.70 0.00
10_P 135_K 0.70 0.00
182_P 82_L 0.70 0.00
131_N 156_K 0.70 0.00
98_I 369_A 0.70 0.00
20_I 336_K 0.70 0.00
228_T 292_G 0.70 0.00
184_Y 379_E 0.70 0.00
89_R 106_L 0.69 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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