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OPENSEQ.org

LPXA - RSEP
UniProt: P0A722 - P0AEH1
Length: 712
Sequences: 525
Seq/Len: 0.74
I_Prob: 0.00

LPXA - Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
Paralog alert: 0.60 [within 20: 0.54] - ratio of genomes with paralogs
Cluster includes: LPXA
RSEP - Regulator of sigma E protease
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSEP
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
90_N 96_Q 1.24 0.00
50_V 42_I 1.22 0.00
98_I 274_L 1.20 0.00
101_G 420_S 1.13 0.00
145_V 358_L 1.11 0.00
165_I 276_I 1.10 0.00
20_I 254_L 1.08 0.00
145_V 380_L 1.02 0.00
48_V 226_L 1.02 0.00
14_V 224_P 1.01 0.00
26_I 13_V 1.01 0.00
165_I 229_V 1.01 0.00
142_A 64_I 1.01 0.00
210_E 421_E 1.00 0.00
123_I 186_G 0.99 0.00
142_A 347_K 0.99 0.00
14_V 233_S 0.99 0.00
147_V 432_S 0.97 0.00
130_G 19_I 0.97 0.00
36_V 157_I 0.97 0.00
216_R 46_K 0.96 0.00
172_G 386_I 0.96 0.00
36_V 288_I 0.96 0.00
90_N 32_R 0.95 0.00
20_I 290_E 0.95 0.00
189_G 447_F 0.95 0.00
66_A 154_V 0.94 0.00
189_G 424_Q 0.94 0.00
43_V 362_I 0.94 0.00
22_A 398_L 0.94 0.00
32_V 122_I 0.93 0.00
99_H 368_A 0.91 0.00
48_V 264_V 0.91 0.00
47_H 54_K 0.91 0.00
72_N 152_K 0.91 0.00
176_G 272_L 0.89 0.00
155_G 199_H 0.89 0.00
233_K 350_T 0.89 0.00
135_L 246_I 0.89 0.00
32_V 331_T 0.88 0.00
62_I 297_K 0.88 0.00
165_I 442_A 0.88 0.00
47_H 113_I 0.88 0.00
111_V 5_L 0.88 0.00
211_A 46_K 0.88 0.00
26_I 342_V 0.87 0.00
171_V 285_L 0.87 0.00
174_C 7_D 0.87 0.00
150_F 61_I 0.87 0.00
159_V 151_L 0.86 0.00
34_P 71_K 0.86 0.00
145_V 390_L 0.86 0.00
44_L 229_V 0.86 0.00
217_N 330_A 0.85 0.00
262_R 390_L 0.85 0.00
83_R 420_S 0.85 0.00
158_A 388_V 0.85 0.00
40_E 63_L 0.84 0.00
20_I 286_T 0.84 0.00
19_S 345_L 0.84 0.00
123_I 246_I 0.84 0.00
231_E 241_Q 0.83 0.00
172_G 234_A 0.83 0.00
170_M 234_A 0.83 0.00
147_V 61_I 0.82 0.00
221_L 100_I 0.81 0.00
58_R 245_R 0.81 0.00
32_V 434_L 0.81 0.00
236_I 341_T 0.81 0.00
237_A 240_L 0.81 0.00
36_V 408_F 0.81 0.00
126_D 330_A 0.81 0.00
206_G 21_V 0.81 0.00
36_V 326_A 0.81 0.00
172_G 8_L 0.81 0.00
157_T 413_K 0.81 0.00
135_L 331_T 0.80 0.00
148_D 371_T 0.80 0.00
220_K 379_Y 0.80 0.00
223_Y 224_P 0.80 0.00
90_N 84_L 0.80 0.00
48_V 261_V 0.79 0.00
145_V 32_R 0.79 0.00
236_I 331_T 0.79 0.00
153_I 54_K 0.79 0.00
105_G 368_A 0.79 0.00
50_V 433_I 0.79 0.00
155_G 94_V 0.78 0.00
236_I 354_K 0.78 0.00
122_H 388_V 0.78 0.00
32_V 350_T 0.78 0.00
229_L 408_F 0.78 0.00
26_I 382_F 0.77 0.00
44_L 283_L 0.77 0.00
135_L 302_V 0.77 0.00
197_V 74_D 0.77 0.00
135_L 335_W 0.77 0.00
233_K 27_F 0.77 0.00
41_G 236_S 0.77 0.00
159_V 85_R 0.77 0.00
28_P 81_V 0.76 0.00
56_I 163_D 0.76 0.00
158_A 148_G 0.76 0.00
90_N 92_K 0.76 0.00
189_G 323_P 0.76 0.00
20_I 136_A 0.76 0.00
165_I 330_A 0.76 0.00
246_V 38_E 0.76 0.00
123_I 312_P 0.76 0.00
260_L 73_L 0.76 0.00
81_P 362_I 0.76 0.00
231_E 380_L 0.76 0.00
201_G 405_H 0.76 0.00
142_A 362_I 0.76 0.00
165_I 35_V 0.76 0.00
175_S 398_L 0.75 0.00
26_I 206_K 0.75 0.00
56_I 254_L 0.75 0.00
205_R 99_A 0.75 0.00
159_V 81_V 0.74 0.00
131_N 5_L 0.74 0.00
147_V 78_E 0.74 0.00
146_S 338_M 0.74 0.00
105_G 233_S 0.74 0.00
59_D 49_W 0.74 0.00
131_N 114_F 0.74 0.00
216_R 153_A 0.74 0.00
68_I 417_G 0.74 0.00
49_V 415_K 0.74 0.00
60_N 381_P 0.74 0.00
147_V 267_N 0.74 0.00
96_V 425_D 0.73 0.00
85_E 345_L 0.73 0.00
15_E 345_L 0.73 0.00
157_T 17_V 0.73 0.00
234_P 333_K 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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