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OPENSEQ.org

EFTS - RNH2
UniProt: P0A6P1 - P10442
Length: 481
Sequences: 329
Seq/Len: 0.70
I_Prob: 0.01

EFTS - Elongation factor Ts
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: EFTS
RNH2 - Ribonuclease HII
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RNH2
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
72_I 123_V 1.58 0.01
102_A 66_L 1.40 0.01
250_N 70_L 1.21 0.00
125_K 28_V 1.16 0.00
192_E 11_L 1.16 0.00
223_F 191_K 1.14 0.00
100_A 15_V 1.09 0.00
21_M 124_K 1.09 0.00
255_G 179_A 1.09 0.00
14_E 186_S 1.07 0.00
30_A 42_G 1.06 0.00
173_V 122_V 1.06 0.00
172_H 27_V 1.05 0.00
237_E 127_S 1.01 0.00
166_V 141_V 1.01 0.00
114_Q 12_V 1.01 0.00
7_S 75_P 1.00 0.00
184_E 146_E 0.99 0.00
29_E 182_H 0.98 0.00
152_I 32_V 0.98 0.00
277_A 64_K 0.97 0.00
76_V 58_Y 0.96 0.00
58_A 91_M 0.95 0.00
167_K 35_D 0.94 0.00
226_E 32_V 0.94 0.00
149_G 39_P 0.94 0.00
224_T 29_T 0.93 0.00
270_T 168_A 0.93 0.00
172_H 73_A 0.93 0.00
244_Q 44_N 0.91 0.00
157_A 180_T 0.91 0.00
166_V 142_T 0.91 0.00
219_R 18_V 0.90 0.00
171_M 107_I 0.90 0.00
274_A 43_L 0.90 0.00
172_H 189_P 0.89 0.00
169_I 18_V 0.89 0.00
34_I 163_K 0.88 0.00
259_F 51_E 0.88 0.00
76_V 181_E 0.87 0.00
198_Q 24_V 0.87 0.00
178_P 132_I 0.86 0.00
138_L 180_T 0.86 0.00
115_F 174_L 0.86 0.00
192_E 169_F 0.86 0.00
95_K 50_S 0.86 0.00
59_D 132_I 0.85 0.00
107_D 109_G 0.85 0.00
136_A 118_P 0.85 0.00
22_D 67_S 0.85 0.00
4_I 53_R 0.84 0.00
152_I 189_P 0.84 0.00
123_V 85_H 0.84 0.00
83_V 87_T 0.83 0.00
222_K 132_I 0.83 0.00
99_A 75_P 0.83 0.00
149_G 109_G 0.83 0.00
93_A 105_V 0.83 0.00
172_H 89_L 0.82 0.00
282_Q 188_G 0.82 0.00
110_V 111_R 0.82 0.00
178_P 124_K 0.82 0.00
98_D 122_V 0.82 0.00
117_E 75_P 0.82 0.00
155_L 122_V 0.82 0.00
215_M 18_V 0.82 0.00
129_N 109_G 0.82 0.00
200_D 163_K 0.82 0.00
257_I 100_I 0.81 0.00
196_Q 169_F 0.81 0.00
36_L 124_K 0.81 0.00
241_T 36_P 0.81 0.00
64_T 159_F 0.81 0.00
94_D 124_K 0.81 0.00
241_T 142_T 0.80 0.00
216_V 50_S 0.80 0.00
189_E 181_E 0.80 0.00
102_A 176_E 0.79 0.00
48_K 90_A 0.79 0.00
11_E 29_T 0.79 0.00
95_K 85_H 0.79 0.00
59_D 48_K 0.79 0.00
270_T 26_A 0.78 0.00
95_K 149_A 0.78 0.00
59_D 32_V 0.78 0.00
114_Q 152_I 0.78 0.00
87_A 80_E 0.78 0.00
4_I 32_V 0.78 0.00
186_V 26_A 0.78 0.00
156_V 115_L 0.77 0.00
222_K 32_V 0.77 0.00
133_R 57_L 0.77 0.00
253_V 179_A 0.77 0.00
224_T 82_N 0.77 0.00
167_K 124_K 0.77 0.00
107_D 174_L 0.77 0.00
169_I 141_V 0.77 0.00
243_G 74_E 0.76 0.00
49_A 32_V 0.76 0.00
106_T 168_A 0.76 0.00
184_E 147_M 0.76 0.00
135_V 29_T 0.76 0.00
259_F 142_T 0.76 0.00
87_A 63_E 0.76 0.00
56_V 124_K 0.76 0.00
178_P 40_I 0.76 0.00
172_H 42_G 0.76 0.00
126_I 102_P 0.75 0.00
200_D 169_F 0.75 0.00
156_V 12_V 0.75 0.00
116_E 146_E 0.75 0.00
269_E 124_K 0.75 0.00
157_A 168_A 0.75 0.00
209_K 133_S 0.75 0.00
141_D 109_G 0.75 0.00
115_F 133_S 0.75 0.00
191_V 117_M 0.75 0.00
237_E 133_S 0.75 0.00
215_M 146_E 0.74 0.00
180_F 50_S 0.74 0.00
7_S 163_K 0.74 0.00
5_T 30_A 0.74 0.00
94_D 133_S 0.74 0.00
240_K 63_E 0.74 0.00
157_A 174_L 0.74 0.00
183_P 38_R 0.74 0.00
31_N 28_V 0.74 0.00
86_D 133_S 0.74 0.00
255_G 188_G 0.73 0.00
210_E 133_S 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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