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OPENSEQ.org

NANA - NANR
UniProt: P0A6L4 - P0A8W0
Length: 560
Sequences: 794
Seq/Len: 1.54
I_Prob: 0.00

NANA - N-acetylneuraminate lyase
Paralog alert: 0.62 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: DAPA NANA YAGE YJHH
NANR - Transcriptional regulator NanR
Paralog alert: 0.78 [within 20: 0.17] - ratio of genomes with paralogs
Cluster includes: CSIR DGOR EXUR FADR GLCC LLDR MCBR NANR PDHR UXUR YDFH YIEP
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
57_S 232_H 1.06 0.00
78_A 232_H 1.04 0.00
125_I 95_V 0.83 0.00
227_G 62_M 0.80 0.00
150_D 31_K 0.79 0.00
134_M 232_H 0.79 0.00
68_E 213_E 0.77 0.00
90_Q 236_E 0.74 0.00
21_A 157_I 0.73 0.00
74_I 40_L 0.72 0.00
154_T 225_I 0.72 0.00
187_Y 245_L 0.72 0.00
287_A 153_K 0.72 0.00
40_D 148_I 0.72 0.00
57_S 44_I 0.71 0.00
228_D 240_A 0.71 0.00
150_D 99_S 0.70 0.00
66_V 241_L 0.70 0.00
231_T 85_V 0.69 0.00
19_Q 232_H 0.69 0.00
278_D 249_S 0.69 0.00
54_Q 80_K 0.69 0.00
131_G 38_E 0.69 0.00
235_L 195_L 0.68 0.00
105_A 43_M 0.68 0.00
36_Q 170_R 0.67 0.00
154_T 55_L 0.67 0.00
75_K 40_L 0.67 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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