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OPENSEQ.org

DAPA - DAPB
UniProt: P0A6L2 - P04036
Length: 565
Sequences: 541
Seq/Len: 0.98
I_Prob: 0.00

DAPA - 4-hydroxy-tetrahydrodipicolinate synthase
Paralog alert: 0.62 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: DAPA NANA YAGE YJHH
DAPB - 4-hydroxy-tetrahydrodipicolinate reductase
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: DAPB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
28_I 182_L 1.08 0.00
166_N 263_D 1.07 0.00
73_V 206_I 1.06 0.00
158_I 33_L 1.03 0.00
52_N 269_D 1.02 0.00
109_R 181_A 0.97 0.00
194_F 130_S 0.95 0.00
213_D 210_T 0.95 0.00
160_I 240_R 0.95 0.00
110_P 102_G 0.95 0.00
4_G 220_H 0.95 0.00
290_G 33_L 0.95 0.00
208_N 219_E 0.94 0.00
282_V 210_T 0.93 0.00
14_D 178_I 0.91 0.00
197_L 10_I 0.90 0.00
90_Q 109_A 0.89 0.00
264_T 85_T 0.87 0.00
97_I 260_G 0.87 0.00
276_D 68_A 0.87 0.00
203_I 122_A 0.86 0.00
227_A 116_D 0.86 0.00
208_N 218_G 0.85 0.00
232_I 108_E 0.84 0.00
4_G 218_G 0.84 0.00
276_D 145_K 0.84 0.00
3_T 236_K 0.84 0.00
49_A 206_I 0.83 0.00
4_G 214_G 0.83 0.00
141_C 131_V 0.82 0.00
271_M 220_H 0.81 0.00
10_V 144_A 0.81 0.00
81_A 77_I 0.80 0.00
236_L 176_E 0.80 0.00
111_S 220_H 0.80 0.00
110_P 215_D 0.80 0.00
211_A 244_A 0.80 0.00
137_S 203_P 0.79 0.00
207_A 210_T 0.79 0.00
197_L 206_I 0.79 0.00
271_M 235_H 0.79 0.00
48_S 9_A 0.79 0.00
128_L 221_T 0.78 0.00
254_W 85_T 0.78 0.00
80_N 130_S 0.78 0.00
250_I 37_L 0.78 0.00
143_L 9_A 0.78 0.00
99_G 65_S 0.78 0.00
159_G 202_V 0.78 0.00
61_M 116_D 0.77 0.00
146_E 25_A 0.77 0.00
203_I 29_E 0.77 0.00
160_I 217_V 0.77 0.00
59_V 178_I 0.77 0.00
282_V 141_E 0.77 0.00
167_L 144_A 0.77 0.00
90_Q 145_K 0.77 0.00
256_C 140_L 0.76 0.00
92_F 132_G 0.76 0.00
31_H 209_A 0.76 0.00
271_M 17_M 0.76 0.00
84_E 195_E 0.76 0.00
147_T 196_G 0.76 0.00
93_N 115_R 0.75 0.00
115_L 267_V 0.75 0.00
9_I 247_A 0.75 0.00
283_R 107_D 0.75 0.00
246_E 17_M 0.75 0.00
249_P 214_G 0.74 0.00
247_P 193_S 0.74 0.00
211_A 220_H 0.74 0.00
67_A 91_F 0.74 0.00
203_I 207_G 0.74 0.00
166_N 190_A 0.74 0.00
41_S 215_D 0.74 0.00
53_H 102_G 0.73 0.00
92_F 129_F 0.73 0.00
65_D 100_V 0.73 0.00
256_C 258_E 0.73 0.00
71_I 117_A 0.73 0.00
96_G 260_G 0.73 0.00
134_N 152_D 0.73 0.00
231_V 176_E 0.73 0.00
19_V 93_R 0.72 0.00
58_D 72_D 0.72 0.00
99_G 250_S 0.72 0.00
7_V 129_F 0.72 0.00
77_T 267_V 0.72 0.00
171_N 254_L 0.72 0.00
54_D 96_G 0.72 0.00
131_I 116_D 0.72 0.00
221_A 89_L 0.72 0.00
267_L 210_T 0.72 0.00
4_G 244_A 0.72 0.00
202_V 17_M 0.71 0.00
217_M 99_M 0.71 0.00
20_C 187_K 0.71 0.00
110_P 127_A 0.71 0.00
282_V 226_D 0.71 0.00
282_V 207_G 0.71 0.00
229_A 146_V 0.71 0.00
197_L 107_D 0.71 0.00
181_F 123_I 0.71 0.00
208_N 214_G 0.70 0.00
243_L 121_I 0.70 0.00
126_T 191_V 0.70 0.00
170_V 136_M 0.70 0.00
4_G 152_D 0.70 0.00
24_L 216_I 0.70 0.00
80_N 17_M 0.70 0.00
153_K 101_I 0.70 0.00
232_I 135_V 0.70 0.00
20_C 19_R 0.69 0.00
119_F 232_E 0.69 0.00
192_L 66_L 0.69 0.00
112_Q 135_V 0.69 0.00
99_G 191_V 0.69 0.00
148_V 268_L 0.69 0.00
246_E 220_H 0.69 0.00
238_P 149_D 0.69 0.00
24_L 218_G 0.69 0.00
135_V 222_A 0.69 0.00
130_Q 175_G 0.69 0.00
15_E 180_H 0.69 0.00
99_G 8_V 0.68 0.00
63_T 182_L 0.68 0.00
208_N 216_I 0.68 0.00
291_L 89_L 0.68 0.00
32_V 248_V 0.68 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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