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OPENSEQ.org

DEF - RSMB
UniProt: P0A6K3 - P36929
Length: 598
Sequences: 640
Seq/Len: 1.08
I_Prob: 0.02

DEF - Peptide deformylase
Paralog alert: 0.44 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: DEF
RSMB - Ribosomal RNA small subunit methyltransferase B
Paralog alert: 0.14 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSMB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
113_D 250_I 1.46 0.02
131_I 326_S 1.33 0.01
3_V 104_E 1.05 0.01
12_E 336_D 1.03 0.01
125_G 350_A 0.94 0.00
69_E 186_D 0.92 0.00
142_L 149_L 0.91 0.00
43_E 366_T 0.91 0.00
143_F 148_W 0.90 0.00
34_D 254_C 0.89 0.00
111_A 266_E 0.89 0.00
164_R 44_L 0.88 0.00
25_N 57_Q 0.87 0.00
8_H 233_A 0.87 0.00
109_I 36_V 0.84 0.00
98_R 253_L 0.84 0.00
52_V 118_I 0.83 0.00
37_E 427_I 0.82 0.00
15_R 102_T 0.82 0.00
28_I 264_I 0.82 0.00
57_R 308_S 0.81 0.00
54_I 43_L 0.81 0.00
104_A 385_Q 0.81 0.00
132_Q 363_H 0.81 0.00
125_G 195_A 0.80 0.00
112_L 19_V 0.80 0.00
19_K 427_I 0.80 0.00
42_E 428_K 0.80 0.00
78_L 304_G 0.79 0.00
104_A 330_V 0.79 0.00
11_D 153_L 0.79 0.00
61_I 234_S 0.79 0.00
42_E 121_V 0.79 0.00
59_I 172_P 0.79 0.00
123_A 105_G 0.78 0.00
131_I 125_F 0.78 0.00
110_R 397_E 0.77 0.00
123_A 304_G 0.77 0.00
58_I 245_Q 0.77 0.00
11_D 337_I 0.77 0.00
3_V 244_P 0.76 0.00
66_N 386_I 0.76 0.00
78_L 288_D 0.76 0.00
30_R 47_L 0.76 0.00
73_L 400_E 0.76 0.00
110_R 99_L 0.76 0.00
31_I 422_F 0.75 0.00
3_V 315_Q 0.75 0.00
132_Q 53_R 0.75 0.00
45_I 364_L 0.75 0.00
113_D 151_K 0.75 0.00
52_V 100_A 0.75 0.00
26_A 187_S 0.74 0.00
113_D 130_E 0.74 0.00
45_I 338_K 0.74 0.00
124_D 172_P 0.74 0.00
82_S 18_V 0.73 0.00
111_A 424_A 0.73 0.00
7_L 361_W 0.73 0.00
144_M 222_G 0.73 0.00
84_E 356_I 0.72 0.00
54_I 23_Q 0.72 0.00
109_I 20_E 0.72 0.00
104_A 365_K 0.72 0.00
165_L 425_K 0.71 0.00
15_R 6_N 0.71 0.00
106_K 386_I 0.71 0.00
94_I 29_L 0.71 0.00
68_D 356_I 0.71 0.00
152_Q 8_R 0.71 0.00
135_M 14_A 0.70 0.00
113_D 364_L 0.70 0.00
22_E 366_T 0.70 0.00
52_V 114_L 0.70 0.00
34_D 246_N 0.69 0.00
147_L 30_P 0.69 0.00
107_V 58_L 0.69 0.00
15_R 169_N 0.69 0.00
19_K 274_V 0.69 0.00
143_F 293_L 0.69 0.00
112_L 283_L 0.69 0.00
27_E 107_I 0.69 0.00
99_A 90_Y 0.69 0.00
78_L 238_C 0.68 0.00
104_A 136_F 0.68 0.00
116_G 332_R 0.68 0.00
102_P 167_A 0.68 0.00
54_I 41_K 0.68 0.00
77_E 344_R 0.68 0.00
109_I 327_A 0.68 0.00
105_E 120_G 0.68 0.00
96_E 422_F 0.68 0.00
142_L 234_S 0.68 0.00
36_F 327_A 0.68 0.00
37_E 21_Q 0.68 0.00
22_E 296_K 0.68 0.00
143_F 49_F 0.68 0.00
3_V 305_R 0.67 0.00
65_E 166_E 0.67 0.00
113_D 299_V 0.67 0.00
73_L 302_G 0.67 0.00
85_T 81_I 0.67 0.00
9_I 84_G 0.66 0.00
105_E 217_V 0.66 0.00
41_A 13_Q 0.66 0.00
83_G 292_R 0.66 0.00
24_V 14_A 0.66 0.00
148_S 53_R 0.66 0.00
74_I 31_P 0.66 0.00
58_I 300_K 0.66 0.00
25_N 417_E 0.66 0.00
114_R 85_L 0.66 0.00
36_F 286_V 0.66 0.00
135_M 108_A 0.66 0.00
57_R 164_I 0.66 0.00
144_M 148_W 0.66 0.00
143_F 52_L 0.66 0.00
114_R 388_A 0.65 0.00
78_L 99_L 0.65 0.00
159_V 327_A 0.65 0.00
116_G 341_R 0.65 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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