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OPENSEQ.org

DEF - FMT
UniProt: P0A6K3 - P23882
Length: 484
Sequences: 967
Seq/Len: 2.03
I_Prob: 0.02

DEF - Peptide deformylase
Paralog alert: 0.44 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: DEF
FMT - Methionyl-tRNA formyltransferase
Paralog alert: 0.28 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FMT PUR3
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
104_A 277_T 1.20 0.02
128_A 288_Q 0.92 0.01
130_C 132_D 0.89 0.01
145_D 89_V 0.87 0.01
15_R 89_V 0.77 0.01
144_M 290_A 0.76 0.01
139_V 61_L 0.74 0.01
125_G 287_L 0.73 0.01
9_I 89_V 0.73 0.01
130_C 118_W 0.71 0.01
3_V 224_L 0.70 0.01
107_V 164_T 0.69 0.01
110_R 98_A 0.69 0.00
12_E 208_L 0.68 0.00
154_R 10_A 0.68 0.00
131_I 228_I 0.67 0.00
10_P 212_E 0.66 0.00
37_E 40_P 0.66 0.00
49_A 184_L 0.64 0.00
19_K 216_D 0.63 0.00
11_D 126_R 0.62 0.00
157_Q 18_R 0.62 0.00
15_R 302_N 0.62 0.00
10_P 93_L 0.61 0.00
58_I 135_T 0.60 0.00
118_P 203_T 0.60 0.00
113_D 72_Q 0.60 0.00
144_M 44_G 0.59 0.00
10_P 126_R 0.59 0.00
126_L 204_Y 0.59 0.00
25_N 193_K 0.59 0.00
25_N 285_L 0.58 0.00
35_M 210_K 0.58 0.00
88_E 208_L 0.58 0.00
135_M 32_G 0.58 0.00
27_E 70_R 0.57 0.00
50_T 292_K 0.57 0.00
10_P 207_K 0.57 0.00
149_P 129_W 0.57 0.00
116_G 203_T 0.57 0.00
126_L 118_W 0.57 0.00
107_V 260_A 0.56 0.00
125_G 230_A 0.56 0.00
15_R 32_G 0.56 0.00
58_I 260_A 0.56 0.00
164_R 8_I 0.56 0.00
100_L 112_G 0.56 0.00
26_A 128_L 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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