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OPENSEQ.org

COAE - PPDD
UniProt: P0A6I9 - P36647
Length: 352
Sequences: 231
Seq/Len: 0.68
I_Prob: 0.00

COAE - Dephospho-CoA kinase
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: COAE
PPDD - Prepilin peptidase-dependent protein D
Paralog alert: 0.07 [within 20: 0.04] - ratio of genomes with paralogs
Cluster includes: PPDD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
26_G 21_I 1.21 0.00
38_Q 16_I 1.21 0.00
115_L 92_V 1.18 0.00
150_E 24_A 1.06 0.00
34_I 115_N 1.05 0.00
152_V 20_A 1.05 0.00
156_L 45_T 1.03 0.00
112_V 20_A 1.02 0.00
54_F 108_T 1.02 0.00
25_L 21_I 1.01 0.00
158_A 24_A 1.00 0.00
103_A 27_I 1.00 0.00
66_Q 110_G 1.00 0.00
78_P 53_V 1.00 0.00
172_V 67_D 0.98 0.00
160_A 116_G 0.97 0.00
35_I 103_L 0.96 0.00
130_V 114_A 0.96 0.00
192_H 5_R 0.95 0.00
103_A 21_I 0.94 0.00
49_A 5_R 0.94 0.00
143_Q 35_R 0.93 0.00
78_P 36_K 0.93 0.00
116_V 24_A 0.92 0.00
120_L 20_A 0.92 0.00
172_V 35_R 0.90 0.00
59_I 14_V 0.90 0.00
98_H 25_I 0.90 0.00
77_N 25_I 0.90 0.00
156_L 41_D 0.89 0.00
12_G 37_A 0.89 0.00
177_G 48_P 0.89 0.00
96_T 103_L 0.88 0.00
172_V 54_E 0.88 0.00
51_A 114_A 0.88 0.00
155_I 20_A 0.87 0.00
93_Q 40_T 0.87 0.00
121_Y 42_M 0.87 0.00
86_A 62_G 0.86 0.00
109_L 27_I 0.86 0.00
197_A 48_P 0.86 0.00
59_I 25_I 0.85 0.00
3_Y 92_V 0.85 0.00
151_H 59_E 0.85 0.00
95_E 106_V 0.85 0.00
150_E 13_M 0.85 0.00
158_A 4_Q 0.84 0.00
49_A 27_I 0.84 0.00
191_A 107_M 0.84 0.00
108_V 39_L 0.84 0.00
101_Q 3_K 0.84 0.00
179_P 20_A 0.84 0.00
80_E 47_V 0.84 0.00
158_A 51_T 0.84 0.00
6_A 34_L 0.84 0.00
49_A 3_K 0.84 0.00
42_P 5_R 0.83 0.00
27_I 48_P 0.83 0.00
74_I 31_Q 0.83 0.00
86_A 21_I 0.83 0.00
6_A 41_D 0.83 0.00
197_A 40_T 0.83 0.00
156_L 40_T 0.83 0.00
5_V 100_L 0.83 0.00
1_M 36_K 0.82 0.00
158_A 54_E 0.82 0.00
170_D 95_T 0.82 0.00
30_I 110_G 0.81 0.00
150_E 51_T 0.81 0.00
49_A 29_A 0.81 0.00
134_P 14_V 0.80 0.00
76_A 61_G 0.80 0.00
179_P 21_I 0.80 0.00
151_H 131_A 0.80 0.00
197_A 20_A 0.80 0.00
163_E 113_N 0.80 0.00
51_A 65_T 0.79 0.00
139_K 115_N 0.79 0.00
192_H 60_H 0.79 0.00
112_V 36_K 0.79 0.00
4_I 25_I 0.79 0.00
5_V 68_G 0.79 0.00
42_P 105_V 0.79 0.00
16_S 122_R 0.78 0.00
172_V 99_S 0.78 0.00
18_V 50_R 0.78 0.00
130_V 88_A 0.78 0.00
110_W 41_D 0.78 0.00
80_E 54_E 0.77 0.00
124_A 41_D 0.77 0.00
30_I 90_G 0.77 0.00
85_N 131_A 0.77 0.00
130_V 31_Q 0.77 0.00
150_E 61_G 0.76 0.00
118_N 56_C 0.76 0.00
91_L 104_S 0.76 0.00
141_T 45_T 0.76 0.00
3_Y 20_A 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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