May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

CLPX - TIG
UniProt: P0A6H1 - P0A850
Length: 856
Sequences: 996
Seq/Len: 1.18
I_Prob: 0.00

CLPX - ATP-dependent Clp protease ATP-binding subunit ClpX
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: CLPX
TIG - Trigger factor
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: TIG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
268_I 344_R 1.31 0.00
89_A 135_A 1.28 0.00
268_I 310_E 1.21 0.00
118_I 310_E 1.20 0.00
26_R 346_V 1.11 0.00
298_F 68_G 1.10 0.00
386_D 134_D 1.05 0.00
247_C 17_I 1.05 0.00
177_Q 224_E 1.02 0.00
358_I 114_E 1.01 0.00
79_I 292_E 0.99 0.00
412_I 264_E 0.99 0.00
268_I 355_I 0.97 0.00
215_I 388_Y 0.94 0.00
242_K 227_K 0.94 0.00
181_V 246_P 0.92 0.00
323_I 249_T 0.90 0.00
258_I 101_E 0.89 0.00
398_I 313_V 0.88 0.00
215_I 112_Y 0.88 0.00
376_V 84_I 0.88 0.00
342_N 160_A 0.87 0.00
52_I 296_K 0.86 0.00
398_I 415_A 0.86 0.00
221_A 165_T 0.85 0.00
344_E 257_G 0.85 0.00
110_L 100_G 0.85 0.00
255_D 192_G 0.85 0.00
287_L 96_E 0.84 0.00
279_D 62_V 0.84 0.00
380_L 371_I 0.83 0.00
311_V 359_E 0.83 0.00
241_S 4_S 0.82 0.00
312_A 310_E 0.82 0.00
305_I 83_K 0.82 0.00
234_E 341_A 0.82 0.00
353_E 106_S 0.82 0.00
64_L 84_I 0.82 0.00
136_L 365_E 0.81 0.00
258_I 53_I 0.80 0.00
266_S 51_M 0.80 0.00
69_E 22_D 0.80 0.00
398_I 58_Y 0.79 0.00
320_E 116_E 0.79 0.00
363_M 101_E 0.79 0.00
48_I 338_E 0.79 0.00
344_E 110_E 0.78 0.00
347_D 138_D 0.78 0.00
66_T 107_V 0.78 0.00
86_K 342_K 0.78 0.00
298_F 121_E 0.78 0.00
76_D 264_E 0.78 0.00
26_R 157_A 0.77 0.00
117_L 310_E 0.77 0.00
44_C 111_V 0.77 0.00
298_F 212_T 0.77 0.00
335_K 137_V 0.77 0.00
398_I 124_E 0.77 0.00
175_K 342_K 0.77 0.00
323_I 307_I 0.77 0.00
107_G 25_E 0.76 0.00
400_E 152_K 0.76 0.00
164_K 190_G 0.76 0.00
330_K 299_D 0.76 0.00
305_I 401_V 0.76 0.00
352_D 62_V 0.76 0.00
271_G 115_V 0.75 0.00
4_K 427_L 0.75 0.00
258_I 39_V 0.75 0.00
2_T 430_Q 0.75 0.00
398_I 251_E 0.74 0.00
177_Q 77_D 0.74 0.00
277_K 200_D 0.74 0.00
357_A 415_A 0.74 0.00
363_M 360_L 0.74 0.00
343_L 84_I 0.74 0.00
330_K 210_E 0.74 0.00
166_L 318_A 0.74 0.00
347_D 137_V 0.73 0.00
346_V 56_Q 0.73 0.00
134_R 240_V 0.73 0.00
82_E 178_E 0.73 0.00
371_G 190_G 0.73 0.00
398_I 37_K 0.73 0.00
290_V 247_E 0.73 0.00
305_I 159_E 0.73 0.00
383_T 210_E 0.73 0.00
327_K 41_I 0.73 0.00
234_E 136_D 0.72 0.00
288_A 236_N 0.72 0.00
358_I 175_E 0.72 0.00
89_A 296_K 0.72 0.00
38_D 322_F 0.72 0.00
393_V 171_S 0.72 0.00
99_L 347_V 0.72 0.00
78_V 34_N 0.72 0.00
393_V 145_R 0.71 0.00
297_K 41_I 0.71 0.00
399_D 411_V 0.71 0.00
411_L 331_E 0.71 0.00
190_S 343_R 0.71 0.00
305_I 420_K 0.71 0.00
134_R 235_I 0.71 0.00
252_A 166_I 0.71 0.00
311_V 354_V 0.71 0.00
351_R 37_K 0.71 0.00
398_I 116_E 0.70 0.00
191_R 237_L 0.70 0.00
344_E 256_F 0.70 0.00
393_V 7_T 0.70 0.00
52_I 81_K 0.70 0.00
344_E 40_R 0.70 0.00
374_S 32_L 0.70 0.00
337_Y 287_K 0.70 0.00
341_F 156_G 0.70 0.00
357_A 343_R 0.70 0.00
273_T 141_L 0.70 0.00
345_G 267_R 0.70 0.00
137_D 92_Y 0.70 0.00
258_I 296_K 0.70 0.00
62_S 391_N 0.70 0.00
268_I 49_V 0.70 0.00
312_A 161_E 0.70 0.00
360_K 237_L 0.69 0.00
89_A 81_K 0.69 0.00
222_V 279_K 0.69 0.00
293_E 310_E 0.69 0.00
82_E 423_T 0.69 0.00
258_I 202_I 0.69 0.00
118_I 117_L 0.69 0.00
215_I 265_G 0.69 0.00
35_Y 19_I 0.69 0.00
338_Q 22_D 0.69 0.00
403_I 391_N 0.69 0.00
82_E 34_N 0.69 0.00
304_F 119_G 0.69 0.00
320_E 92_Y 0.69 0.00
332_A 104_T 0.69 0.00
236_L 365_E 0.69 0.00
191_R 318_A 0.69 0.00
19_G 274_M 0.69 0.00
41_V 394_L 0.69 0.00
385_Y 309_S 0.69 0.00
271_G 54_V 0.69 0.00
311_V 18_T 0.68 0.00
181_V 19_I 0.68 0.00
381_L 137_V 0.68 0.00
175_K 346_V 0.68 0.00
86_K 376_S 0.68 0.00
118_I 30_S 0.68 0.00
89_A 49_V 0.68 0.00
79_I 37_K 0.68 0.00
118_I 126_E 0.68 0.00
401_S 343_R 0.68 0.00
361_K 240_V 0.68 0.00
191_R 211_F 0.68 0.00
181_V 358_N 0.68 0.00
65_P 211_F 0.67 0.00
290_V 220_E 0.67 0.00
315_N 141_L 0.67 0.00
248_G 248_L 0.67 0.00
256_K 360_L 0.67 0.00
29_I 86_P 0.67 0.00
371_G 199_E 0.67 0.00
164_K 90_P 0.67 0.00
396_V 96_E 0.67 0.00
386_D 115_V 0.67 0.00
221_A 259_E 0.67 0.00
330_K 229_K 0.67 0.00
272_A 415_A 0.67 0.00
38_D 339_E 0.67 0.00
194_D 252_F 0.67 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.53 seconds.