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OPENSEQ.org

ARGR - PYRH
UniProt: P0A6D0 - P0A7E9
Length: 397
Sequences: 225
Seq/Len: 0.61
I_Prob: 0.53

ARGR - Arginine repressor
Paralog alert: 0.39 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: ARGR
PYRH - Uridylate kinase
Paralog alert: 0.90 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: PYRH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
18_L 135_S 2.09 0.53
97_V 53_V 1.30 0.08
87_L 226_L 1.29 0.07
139_F 150_C 1.19 0.05
90_D 126_L 1.16 0.05
58_T 140_N 1.16 0.05
125_I 36_R 1.15 0.04
78_T 118_S 1.13 0.04
17_L 14_L 1.13 0.04
88_D 134_L 1.12 0.04
98_I 137_G 1.10 0.04
132_F 49_I 1.10 0.04
131_I 121_E 1.10 0.04
17_L 75_V 1.08 0.04
11_V 227_R 1.08 0.03
89_I 229_V 1.06 0.03
18_L 138_T 1.05 0.03
56_V 166_K 1.04 0.03
95_V 10_K 1.03 0.03
149_L 143_F 1.03 0.03
151_L 134_L 1.03 0.03
120_G 46_E 1.02 0.03
133_T 184_Y 1.02 0.03
88_D 45_V 1.01 0.03
41_I 150_C 1.01 0.03
27_G 106_S 1.01 0.03
148_I 128_N 1.00 0.03
5_A 199_V 1.00 0.03
57_R 226_L 1.00 0.02
118_A 95_L 1.00 0.02
18_L 105_M 0.99 0.02
137_N 229_V 0.97 0.02
117_K 46_E 0.97 0.02
132_F 71_M 0.97 0.02
28_E 188_T 0.97 0.02
68_C 140_N 0.97 0.02
28_E 190_S 0.96 0.02
95_V 134_L 0.96 0.02
61_A 191_E 0.95 0.02
143_D 240_T 0.95 0.02
131_I 122_A 0.94 0.02
58_T 111_N 0.94 0.02
107_L 87_N 0.94 0.02
23_F 181_A 0.93 0.02
134_T 34_L 0.93 0.02
14_F 131_V 0.93 0.02
137_N 116_S 0.92 0.02
16_A 114_C 0.91 0.02
58_T 50_Q 0.91 0.02
119_E 214_P 0.91 0.02
121_I 119_W 0.91 0.02
135_P 137_G 0.90 0.02
119_E 194_E 0.90 0.02
106_Q 138_T 0.90 0.02
88_D 168_D 0.90 0.02
18_L 233_E 0.90 0.02
114_S 162_L 0.90 0.02
122_L 137_G 0.90 0.02
31_A 126_L 0.89 0.02
41_I 229_V 0.89 0.01
36_Q 174_D 0.89 0.01
24_S 68_K 0.89 0.01
51_T 150_C 0.89 0.01
121_I 138_T 0.88 0.01
122_L 170_V 0.88 0.01
17_L 194_E 0.88 0.01
53_F 131_V 0.87 0.01
11_V 31_A 0.87 0.01
57_R 122_A 0.87 0.01
59_R 38_A 0.86 0.01
17_L 77_D 0.86 0.01
36_Q 214_P 0.86 0.01
69_L 14_L 0.86 0.01
137_N 143_F 0.86 0.01
98_I 36_R 0.86 0.01
124_T 125_L 0.86 0.01
120_G 11_R 0.86 0.01
114_S 95_L 0.85 0.01
79_S 157_E 0.85 0.01
80_S 30_D 0.85 0.01
132_F 14_L 0.84 0.01
31_A 49_I 0.84 0.01
134_T 230_V 0.84 0.01
28_E 186_Q 0.83 0.01
143_D 181_A 0.83 0.01
39_D 184_Y 0.83 0.01
20_E 49_I 0.83 0.01
22_K 193_L 0.83 0.01
144_L 95_L 0.82 0.01
131_I 190_S 0.82 0.01
19_K 194_E 0.82 0.01
60_N 162_L 0.82 0.01
96_V 87_N 0.82 0.01
8_E 187_L 0.82 0.01
88_D 226_L 0.82 0.01
112_L 240_T 0.82 0.01
23_F 70_G 0.81 0.01
29_I 99_Y 0.81 0.01
72_E 118_S 0.81 0.01
97_V 105_M 0.81 0.01
46_V 192_V 0.81 0.01
82_L 41_I 0.80 0.01
147_A 232_G 0.80 0.01
39_D 97_R 0.80 0.01
51_T 196_E 0.80 0.01
83_K 50_Q 0.80 0.01
133_T 113_V 0.80 0.01
134_T 138_T 0.80 0.01
64_E 52_G 0.80 0.01
60_N 160_V 0.79 0.01
6_K 196_E 0.79 0.01
135_P 216_R 0.79 0.01
124_T 105_M 0.79 0.01
132_F 233_E 0.79 0.01
62_K 118_S 0.79 0.01
18_L 168_D 0.79 0.01
102_P 137_G 0.78 0.01
21_E 186_Q 0.78 0.01
31_A 41_I 0.78 0.01
13_A 122_A 0.78 0.01
13_A 222_K 0.78 0.01
69_L 31_A 0.78 0.01
57_R 134_L 0.78 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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