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OPENSEQ.org

ARGB - PYRB
UniProt: P0A6C8 - P0A786
Length: 569
Sequences: 482
Seq/Len: 0.87
I_Prob: 0.00

ARGB - Acetylglutamate kinase
Paralog alert: 0.46 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ARGB
PYRB - Aspartate carbamoyltransferase catalytic chain
Paralog alert: 0.85 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: OTC1 OTC2 PYRB YGEW
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
134_N 48_C 1.19 0.00
108_D 250_L 1.09 0.00
256_I 50_F 1.09 0.00
49_D 120_S 1.08 0.00
221_A 109_Q 1.03 0.00
198_A 161_V 1.01 0.00
74_D 191_D 1.00 0.00
140_G 222_E 0.99 0.00
125_A 107_H 0.97 0.00
17_E 289_Q 0.97 0.00
153_E 256_H 0.96 0.00
126_Q 46_A 0.87 0.00
221_A 10_I 0.86 0.00
219_N 160_M 0.86 0.00
179_L 24_V 0.86 0.00
138_E 19_D 0.85 0.00
146_S 275_A 0.85 0.00
129_S 101_D 0.85 0.00
145_V 125_V 0.85 0.00
50_E 123_V 0.84 0.00
196_M 10_I 0.83 0.00
193_I 77_S 0.83 0.00
206_E 222_E 0.83 0.00
107_G 97_S 0.83 0.00
172_L 225_I 0.83 0.00
65_L 160_M 0.83 0.00
20_L 289_Q 0.81 0.00
196_M 16_L 0.81 0.00
126_Q 301_L 0.81 0.00
88_L 96_I 0.81 0.00
125_A 128_A 0.81 0.00
203_Q 279_D 0.80 0.00
89_L 223_V 0.80 0.00
28_V 285_W 0.80 0.00
75_I 276_T 0.79 0.00
134_N 264_V 0.79 0.00
177_I 196_P 0.79 0.00
145_V 25_L 0.79 0.00
240_A 254_D 0.78 0.00
227_T 196_P 0.78 0.00
24_F 281_T 0.78 0.00
75_I 226_L 0.77 0.00
75_I 100_V 0.77 0.00
88_L 25_L 0.77 0.00
33_S 26_A 0.77 0.00
167_A 282_P 0.77 0.00
4_P 199_I 0.77 0.00
133_I 125_V 0.77 0.00
195_E 103_I 0.77 0.00
178_L 99_Y 0.76 0.00
94_K 126_L 0.76 0.00
220_A 159_A 0.76 0.00
145_V 276_T 0.76 0.00
256_I 175_Q 0.76 0.00
172_L 157_H 0.76 0.00
248_N 10_I 0.75 0.00
129_S 255_L 0.75 0.00
130_P 277_D 0.75 0.00
159_V 40_L 0.75 0.00
140_G 154_D 0.75 0.00
60_K 209_A 0.75 0.00
107_G 120_S 0.75 0.00
176_L 137_T 0.74 0.00
189_K 171_H 0.74 0.00
28_V 265_L 0.74 0.00
113_T 118_E 0.74 0.00
94_K 171_H 0.74 0.00
28_V 227_Y 0.73 0.00
202_E 89_L 0.73 0.00
119_L 86_G 0.73 0.00
138_E 248_F 0.73 0.00
74_D 45_I 0.73 0.00
142_L 139_T 0.73 0.00
96_Q 125_V 0.73 0.00
248_N 8_K 0.73 0.00
142_L 286_Y 0.72 0.00
174_A 273_E 0.72 0.00
153_E 250_L 0.71 0.00
145_V 164_L 0.71 0.00
148_I 253_S 0.71 0.00
194_A 126_L 0.70 0.00
69_P 185_F 0.70 0.00
32_E 120_S 0.70 0.00
222_L 305_L 0.70 0.00
194_A 23_L 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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