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OPENSEQ.org

ISCS - NIFU
UniProt: P0A6B7 - P0ACD4
Length: 532
Sequences: 1169
Seq/Len: 2.29
I_Prob: 0.01

ISCS - Cysteine desulfurase
Paralog alert: 0.93 [within 20: 0.43] - ratio of genomes with paralogs
Cluster includes: AAT ALAA ALAC ARNB AVTA CSDA HIS8 ISCS MALY RFFA SERC SUFS TYRB YBDL YDCR YJIR
NIFU - NifU-like protein
Paralog alert: 0.07 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: NIFU
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
383_L 47_V 1.08 0.01
108_L 46_K 0.82 0.00
133_D 45_I 0.76 0.00
105_K 34_A 0.75 0.00
194_Q 21_D 0.72 0.00
77_E 33_G 0.70 0.00
227_E 112_D 0.69 0.00
172_A 13_N 0.67 0.00
132_I 92_D 0.67 0.00
305_F 99_L 0.67 0.00
337_Y 99_L 0.67 0.00
319_D 98_E 0.67 0.00
294_E 82_L 0.66 0.00
168_E 13_N 0.66 0.00
209_G 113_A 0.66 0.00
111_C 126_E 0.65 0.00
195_L 122_K 0.65 0.00
127_Q 23_N 0.64 0.00
194_Q 83_D 0.64 0.00
292_D 21_D 0.64 0.00
85_G 56_A 0.64 0.00
143_D 82_L 0.63 0.00
311_E 99_L 0.63 0.00
324_S 30_G 0.63 0.00
315_M 99_L 0.63 0.00
112_R 35_P 0.63 0.00
365_E 126_E 0.63 0.00
126_P 80_K 0.62 0.00
329_T 73_V 0.62 0.00
363_E 118_I 0.62 0.00
41_H 116_A 0.60 0.00
20_A 73_V 0.60 0.00
382_D 125_R 0.60 0.00
234_G 16_N 0.60 0.00
226_I 80_K 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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