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OPENSEQ.org

DDLB - MRAZ
UniProt: P07862 - P22186
Length: 458
Sequences: 395
Seq/Len: 0.88
I_Prob: 0.00

DDLB - D-alanine--D-alanine ligase B
Paralog alert: 0.89 [within 20: 0.46] - ratio of genomes with paralogs
Cluster includes: ACCC DDLA DDLB GSHB PUR2 PURK PURT RIMK
MRAZ - Protein MraZ
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: MRAZ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
40_V 150_L 1.33 0.00
78_L 92_L 1.19 0.00
102_L 18_V 1.17 0.00
50_L 83_E 1.17 0.00
18_V 149_D 1.17 0.00
157_V 119_L 1.16 0.00
81_L 36_C 1.12 0.00
175_E 119_L 1.12 0.00
166_A 99_R 1.09 0.00
155_S 109_M 1.02 0.00
260_L 89_A 0.99 0.00
228_G 6_T 0.97 0.00
58_V 131_E 0.96 0.00
72_L 20_T 0.95 0.00
293_S 143_L 0.93 0.00
141_V 121_D 0.93 0.00
167_L 34_M 0.92 0.00
89_M 95_A 0.92 0.00
274_S 89_A 0.92 0.00
303_E 60_L 0.91 0.00
113_P 94_I 0.91 0.00
107_A 104_L 0.91 0.00
58_V 122_E 0.90 0.00
5_I 10_L 0.90 0.00
238_Q 131_E 0.90 0.00
157_V 121_D 0.90 0.00
74_G 26_L 0.89 0.00
109_L 123_T 0.89 0.00
240_L 18_V 0.88 0.00
204_Q 94_I 0.87 0.00
56_Q 35_V 0.87 0.00
61_A 20_T 0.86 0.00
5_I 103_G 0.85 0.00
42_P 150_L 0.85 0.00
280_H 88_G 0.85 0.00
80_G 58_Q 0.85 0.00
289_Q 110_L 0.84 0.00
190_V 56_I 0.84 0.00
271_A 64_S 0.84 0.00
202_R 6_T 0.83 0.00
168_R 68_P 0.83 0.00
146_S 8_V 0.83 0.00
227_A 107_E 0.83 0.00
146_S 110_L 0.83 0.00
109_L 32_G 0.82 0.00
24_A 18_V 0.82 0.00
58_V 147_L 0.81 0.00
103_L 94_I 0.81 0.00
280_H 119_L 0.81 0.00
258_V 36_C 0.81 0.00
143_V 10_L 0.81 0.00
140_P 8_V 0.81 0.00
93_L 60_L 0.81 0.00
29_G 78_L 0.81 0.00
236_N 10_L 0.80 0.00
22_S 47_L 0.79 0.00
94_S 108_V 0.79 0.00
139_L 89_A 0.79 0.00
214_A 35_V 0.79 0.00
248_L 54_E 0.79 0.00
98_L 36_C 0.79 0.00
25_A 59_K 0.78 0.00
194_G 103_G 0.78 0.00
285_M 22_Y 0.78 0.00
219_D 31_A 0.78 0.00
206_S 10_L 0.78 0.00
32_E 92_L 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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