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OPENSEQ.org

AROB - GPH
UniProt: P07639 - P32662
Length: 614
Sequences: 513
Seq/Len: 0.87
I_Prob: 0.00

AROB - 3-dehydroquinate synthase
Paralog alert: 0.75 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: ADH2 AROB EUTG FUCO GLDA YBDH YQHD
GPH - Phosphoglycolate phosphatase
Paralog alert: 0.89 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: GPH PGMB YFBT YIEH YIGB YIHX YJJG YNIC YQAB YRFG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
269_A 177_A 1.15 0.00
37_V 118_D 1.12 0.00
185_V 200_A 0.97 0.00
40_V 169_H 0.96 0.00
100_V 177_A 0.94 0.00
127_V 178_E 0.93 0.00
172_T 235_L 0.89 0.00
127_V 108_E 0.88 0.00
221_R 181_G 0.86 0.00
88_L 208_V 0.82 0.00
277_R 10_V 0.82 0.00
229_V 187_M 0.81 0.00
127_V 151_A 0.81 0.00
224_E 228_I 0.80 0.00
81_L 134_T 0.79 0.00
277_R 112_L 0.77 0.00
99_L 143_P 0.77 0.00
300_A 98_F 0.75 0.00
249_F 114_P 0.75 0.00
305_N 190_V 0.75 0.00
259_Y 127_G 0.75 0.00
37_V 9_G 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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