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OPENSEQ.org

YFIB - YJAB
UniProt: P07021 - P09163
Length: 307
Sequences: 173
Seq/Len: 0.60
I_Prob: 0.00

YFIB - Putative lipoprotein YfiB
Paralog alert: 0.57 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: PAL YFIB YIAD
YJAB - Uncharacterized N-acetyltransferase YjaB
Paralog alert: 0.86 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: ATDA PHNO RIMI RIMJ RIML YAFP YEDL YHHY YIAC YJAB YJGM YNCA YPEA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
155_V 105_N 1.21 0.00
125_S 59_R 1.18 0.00
60_D 33_A 1.17 0.00
99_S 126_G 1.10 0.00
114_D 82_V 1.09 0.00
111_V 73_M 1.07 0.00
143_T 92_V 1.05 0.00
32_A 59_R 1.04 0.00
122_I 54_V 1.02 0.00
157_I 78_I 1.00 0.00
113_A 53_W 1.00 0.00
61_Y 14_E 0.99 0.00
138_I 63_V 0.99 0.00
122_I 55_A 0.98 0.00
94_N 63_V 0.92 0.00
148_A 16_L 0.92 0.00
144_A 73_M 0.90 0.00
140_S 54_V 0.90 0.00
82_G 73_M 0.90 0.00
144_A 14_E 0.86 0.00
80_S 64_G 0.86 0.00
54_I 3_I 0.85 0.00
130_Q 62_P 0.84 0.00
17_T 64_G 0.84 0.00
124_R 78_I 0.84 0.00
82_G 141_N 0.83 0.00
127_L 41_D 0.83 0.00
82_G 5_I 0.82 0.00
125_S 97_S 0.81 0.00
71_I 108_E 0.81 0.00
54_I 115_G 0.80 0.00
79_A 73_M 0.80 0.00
82_G 41_D 0.80 0.00
65_P 69_S 0.80 0.00
127_L 134_G 0.80 0.00
53_A 122_F 0.79 0.00
118_M 118_K 0.79 0.00
44_G 72_H 0.79 0.00
60_D 92_V 0.79 0.00
152_R 18_A 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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