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OPENSEQ.org

OMPC - YFAE
UniProt: P06996 - P0ABW3
Length: 451
Sequences: 291
Seq/Len: 0.66
I_Prob: 0.00

OMPC - Outer membrane protein C
Paralog alert: 0.84 [within 20: 0.14] - ratio of genomes with paralogs
Cluster includes: NMPC OMPC OMPF OMPN PHOE YEDS
YFAE - Uncharacterized ferredoxin-like protein YfaE
Paralog alert: 0.79 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: YFAE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
298_Y 4_V 1.28 0.00
150_A 69_I 1.09 0.00
257_A 30_N 1.01 0.00
248_Y 13_L 0.99 0.00
68_T 75_R 0.97 0.00
122_T 44_S 0.94 0.00
96_V 44_S 0.93 0.00
172_G 82_I 0.93 0.00
245_G 49_L 0.90 0.00
245_G 22_L 0.87 0.00
285_Q 78_G 0.87 0.00
234_G 31_V 0.86 0.00
12_A 62_A 0.86 0.00
59_L 63_F 0.86 0.00
333_T 50_V 0.85 0.00
282_A 20_P 0.85 0.00
81_I 21_S 0.85 0.00
205_I 13_L 0.84 0.00
164_L 61_L 0.84 0.00
212_F 30_N 0.83 0.00
76_Q 24_A 0.82 0.00
215_G 55_D 0.81 0.00
34_L 10_G 0.81 0.00
30_N 57_I 0.80 0.00
92_S 55_D 0.80 0.00
214_I 67_G 0.79 0.00
162_D 19_H 0.79 0.00
106_V 80_I 0.79 0.00
40_G 44_S 0.79 0.00
214_I 82_I 0.79 0.00
62_K 69_I 0.78 0.00
327_F 2_A 0.78 0.00
55_T 60_P 0.77 0.00
164_L 60_P 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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