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OPENSEQ.org

RSMA - TATD
UniProt: P06992 - P27859
Length: 533
Sequences: 492
Seq/Len: 0.96
I_Prob: 0.00

RSMA - Ribosomal RNA small subunit methyltransferase A
Paralog alert: 0.09 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSMA
TATD - Tat-linked quality control protein TatD
Paralog alert: 0.46 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: TATD YCFH YJJV
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
228_S 61_V 1.26 0.00
95_F 236_W 1.20 0.00
192_V 139_L 1.08 0.00
64_V 36_G 1.03 0.00
249_A 155_T 0.99 0.00
178_P 156_G 0.97 0.00
225_I 225_H 0.96 0.00
187_V 194_P 0.95 0.00
192_V 73_T 0.95 0.00
214_T 223_P 0.95 0.00
93_M 77_I 0.94 0.00
237_V 206_Y 0.92 0.00
171_I 59_A 0.92 0.00
228_S 98_R 0.90 0.00
80_F 193_I 0.89 0.00
228_S 9_T 0.89 0.00
59_L 256_F 0.88 0.00
256_Q 120_L 0.87 0.00
155_K 77_I 0.86 0.00
44_I 223_P 0.86 0.00
67_L 6_V 0.86 0.00
176_V 38_N 0.86 0.00
154_S 130_D 0.85 0.00
44_I 119_D 0.85 0.00
96_N 47_K 0.85 0.00
26_I 37_T 0.85 0.00
172_P 138_L 0.85 0.00
188_D 156_G 0.85 0.00
64_V 57_S 0.85 0.00
245_P 28_G 0.84 0.00
242_G 125_F 0.84 0.00
202_H 243_W 0.84 0.00
172_P 130_D 0.84 0.00
207_V 26_D 0.84 0.00
64_V 49_A 0.84 0.00
28_S 101_S 0.83 0.00
208_R 236_W 0.83 0.00
226_R 64_H 0.83 0.00
251_N 66_S 0.83 0.00
10_L 2_F 0.83 0.00
192_V 189_L 0.82 0.00
134_A 188_E 0.82 0.00
254_V 242_A 0.82 0.00
59_L 169_I 0.82 0.00
220_Q 224_A 0.82 0.00
24_F 172_G 0.81 0.00
215_T 139_L 0.81 0.00
176_V 183_G 0.81 0.00
236_E 75_E 0.81 0.00
253_S 116_I 0.81 0.00
249_A 36_G 0.80 0.00
160_L 60_G 0.80 0.00
155_K 219_R 0.80 0.00
166_Y 156_G 0.80 0.00
176_V 154_F 0.79 0.00
90_Q 154_F 0.79 0.00
50_A 207_L 0.79 0.00
154_S 29_V 0.79 0.00
39_Q 136_M 0.78 0.00
214_T 219_R 0.78 0.00
243_I 29_V 0.78 0.00
178_P 172_G 0.78 0.00
33_I 72_A 0.78 0.00
171_I 212_L 0.78 0.00
180_A 8_L 0.78 0.00
12_R 24_A 0.78 0.00
256_Q 138_L 0.78 0.00
14_R 37_T 0.77 0.00
256_Q 111_V 0.77 0.00
159_R 172_G 0.77 0.00
225_I 137_T 0.77 0.00
87_I 130_D 0.77 0.00
121_P 57_S 0.77 0.00
146_N 138_L 0.76 0.00
118_I 66_S 0.76 0.00
107_P 119_D 0.76 0.00
122_L 153_C 0.76 0.00
182_T 34_I 0.76 0.00
155_K 195_A 0.76 0.00
51_L 8_L 0.76 0.00
92_A 248_T 0.76 0.00
28_S 176_W 0.75 0.00
125_H 119_D 0.75 0.00
212_R 154_F 0.75 0.00
12_R 61_V 0.75 0.00
198_A 254_T 0.75 0.00
118_I 153_C 0.75 0.00
30_V 130_D 0.75 0.00
21_N 171_I 0.75 0.00
263_Y 190_L 0.74 0.00
180_A 172_G 0.74 0.00
44_I 116_I 0.74 0.00
138_F 116_I 0.74 0.00
24_F 179_D 0.74 0.00
194_L 48_L 0.73 0.00
74_R 229_I 0.73 0.00
21_N 197_K 0.73 0.00
42_V 174_T 0.73 0.00
146_N 75_E 0.73 0.00
163_M 13_F 0.73 0.00
164_A 135_F 0.73 0.00
44_I 236_W 0.73 0.00
142_K 138_L 0.73 0.00
254_V 156_G 0.73 0.00
44_I 245_A 0.73 0.00
132_A 229_I 0.73 0.00
167_Y 178_C 0.73 0.00
194_L 138_L 0.73 0.00
126_L 149_A 0.73 0.00
168_C 17_R 0.72 0.00
30_V 208_L 0.72 0.00
187_V 123_P 0.72 0.00
65_I 153_C 0.72 0.00
133_I 33_L 0.72 0.00
72_A 208_L 0.72 0.00
23_Q 21_V 0.72 0.00
194_L 117_A 0.72 0.00
98_G 177_V 0.72 0.00
62_L 179_D 0.72 0.00
161_S 40_R 0.72 0.00
86_T 32_L 0.71 0.00
83_P 47_K 0.71 0.00
227_N 248_T 0.71 0.00
13_K 221_N 0.71 0.00
110_V 191_P 0.71 0.00
160_L 221_N 0.71 0.00
210_L 20_V 0.71 0.00
86_T 107_E 0.71 0.00
245_P 240_D 0.71 0.00
213_I 66_S 0.70 0.00
34_N 246_A 0.70 0.00
259_Q 137_T 0.70 0.00
8_G 25_F 0.70 0.00
199_T 244_L 0.70 0.00
50_A 151_L 0.70 0.00
154_S 47_K 0.70 0.00
257_Y 177_V 0.70 0.00
167_Y 52_Y 0.70 0.00
21_N 87_V 0.70 0.00
30_V 254_T 0.70 0.00
44_I 38_N 0.70 0.00
164_A 88_A 0.70 0.00
50_A 24_A 0.70 0.00
196_P 200_I 0.69 0.00
111_F 6_V 0.69 0.00
126_L 183_G 0.69 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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