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OPENSEQ.org

ERA - YBEY
UniProt: P06616 - P0A898
Length: 456
Sequences: 395
Seq/Len: 0.91
I_Prob: 0.27

ERA - GTPase Era
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ERA
YBEY - Endoribonuclease YbeY
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YBEY
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
242_Q 115_G 1.79 0.27
213_S 115_G 1.37 0.09
237_V 115_G 1.25 0.06
231_I 60_G 1.21 0.05
120_I 54_L 1.17 0.05
242_Q 71_P 1.17 0.05
206_L 71_P 1.15 0.04
25_L 43_I 1.11 0.04
16_R 85_D 1.10 0.04
59_I 88_I 1.09 0.04
208_A 31_V 1.09 0.04
203_M 102_K 1.09 0.04
97_E 54_L 1.06 0.03
288_D 129_E 1.04 0.03
12_A 41_V 1.02 0.03
190_Q 103_P 1.01 0.03
112_L 50_E 1.00 0.03
169_V 119_L 1.00 0.03
210_L 97_A 1.00 0.03
284_G 88_I 0.99 0.02
179_H 106_A 0.98 0.02
78_M 63_K 0.98 0.02
194_A 32_I 0.97 0.02
257_I 50_E 0.97 0.02
166_A 57_T 0.97 0.02
213_S 136_L 0.94 0.02
213_S 134_E 0.94 0.02
50_I 142_L 0.94 0.02
182_E 127_D 0.94 0.02
75_N 96_E 0.94 0.02
119_V 128_D 0.93 0.02
270_E 129_E 0.93 0.02
176_A 77_G 0.93 0.02
206_L 115_G 0.93 0.02
171_K 22_S 0.91 0.02
185_I 29_N 0.91 0.02
121_L 68_L 0.91 0.02
205_F 24_F 0.90 0.02
40_A 140_I 0.90 0.02
163_D 41_V 0.89 0.02
49_G 130_A 0.88 0.02
180_F 117_L 0.88 0.02
257_I 127_D 0.88 0.02
273_V 43_I 0.88 0.02
110_N 61_K 0.88 0.01
34_S 130_A 0.88 0.01
192_F 116_S 0.87 0.01
124_N 59_R 0.87 0.01
292_L 74_V 0.87 0.01
136_L 128_D 0.87 0.01
128_N 23_Q 0.87 0.01
284_G 83_L 0.87 0.01
221_F 140_I 0.86 0.01
254_I 112_V 0.86 0.01
59_I 32_I 0.86 0.01
286_A 100_Q 0.85 0.01
151_I 23_Q 0.85 0.01
207_G 131_E 0.85 0.01
212_Y 102_K 0.85 0.01
242_Q 136_L 0.84 0.01
253_K 24_F 0.84 0.01
268_M 40_E 0.84 0.01
212_Y 46_V 0.84 0.01
242_Q 134_E 0.84 0.01
76_R 46_V 0.84 0.01
132_K 109_A 0.84 0.01
141_F 129_E 0.84 0.01
115_G 108_W 0.84 0.01
226_R 77_G 0.84 0.01
220_R 64_P 0.84 0.01
250_K 130_A 0.83 0.01
79_N 89_C 0.83 0.01
289_E 129_E 0.83 0.01
93_I 89_C 0.82 0.01
236_L 54_L 0.82 0.01
192_F 31_V 0.82 0.01
40_A 71_P 0.82 0.01
198_I 94_E 0.82 0.01
75_N 148_D 0.82 0.01
213_S 71_P 0.82 0.01
184_Y 130_A 0.81 0.01
112_L 106_A 0.81 0.01
151_I 19_P 0.81 0.01
72_R 72_F 0.81 0.01
237_V 97_A 0.81 0.01
203_M 107_H 0.81 0.01
296_G 46_V 0.81 0.01
241_G 88_I 0.81 0.01
40_A 91_Q 0.81 0.01
159_G 94_E 0.81 0.01
107_M 132_E 0.80 0.01
50_I 113_V 0.80 0.01
239_R 128_D 0.80 0.01
122_A 17_G 0.79 0.01
259_I 45_V 0.79 0.01
212_Y 96_E 0.79 0.01
36_T 110_H 0.79 0.01
244_K 28_L 0.79 0.01
231_I 56_L 0.78 0.01
144_S 143_A 0.78 0.01
50_I 63_K 0.78 0.01
234_L 95_K 0.78 0.01
255_K 95_K 0.78 0.01
194_A 47_D 0.78 0.01
287_D 43_I 0.78 0.01
212_Y 66_N 0.77 0.01
148_F 143_A 0.77 0.01
203_M 85_D 0.77 0.01
212_Y 148_D 0.77 0.01
252_A 53_S 0.77 0.01
273_V 82_L 0.77 0.01
215_T 102_K 0.77 0.01
34_S 89_C 0.77 0.01
142_L 140_I 0.77 0.01
104_D 71_P 0.77 0.01
49_G 134_E 0.77 0.01
232_N 110_H 0.76 0.01
16_R 87_V 0.76 0.01
148_F 80_M 0.76 0.01
108_V 108_W 0.76 0.01
79_N 138_T 0.76 0.01
91_L 132_E 0.76 0.01
60_Y 106_A 0.76 0.01
142_L 24_F 0.76 0.01
92_V 10_L 0.76 0.01
163_D 9_Q 0.75 0.01
260_E 127_D 0.75 0.01
198_I 10_L 0.75 0.01
18_N 70_F 0.75 0.01
295_L 74_V 0.75 0.01
49_G 88_I 0.75 0.01
236_L 112_V 0.75 0.01
297_Y 74_V 0.74 0.01
272_P 22_S 0.74 0.01
85_S 147_E 0.74 0.01
85_S 36_Q 0.74 0.01
50_I 35_F 0.74 0.01
10_F 85_D 0.74 0.01
244_K 27_W 0.74 0.01
231_I 24_F 0.74 0.01
50_I 61_K 0.74 0.01
92_V 131_E 0.74 0.01
268_M 95_K 0.74 0.01
100_R 105_E 0.74 0.01
215_T 66_N 0.74 0.01
242_Q 137_E 0.73 0.01
282_K 138_T 0.73 0.01
136_L 88_I 0.73 0.01
212_Y 107_H 0.73 0.01
177_T 85_D 0.73 0.01
235_I 45_V 0.73 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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