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OPENSEQ.org

GCP - YJEE
UniProt: P05852 - P0AF67
Length: 490
Sequences: 420
Seq/Len: 0.88
I_Prob: 0.00

GCP - Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
Paralog alert: 0.06 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: GCP
YJEE - UPF0079 ATP-binding protein YjeE
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YJEE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
76_V 58_V 1.39 0.00
270_S 92_F 1.22 0.00
181_P 63_Y 1.18 0.00
76_V 142_S 1.17 0.00
260_F 46_R 1.15 0.00
116_L 10_D 1.14 0.00
15_I 94_G 1.14 0.00
107_I 18_G 1.11 0.00
265_M 68_P 1.06 0.00
287_R 21_V 1.04 0.00
245_D 105_C 1.04 0.00
5_G 131_Q 1.03 0.00
269_V 92_F 1.02 0.00
46_L 115_G 1.01 0.00
325_V 75_M 1.00 0.00
330_P 20_R 1.00 0.00
112_M 92_F 0.98 0.00
265_M 137_V 0.98 0.00
46_L 43_T 0.98 0.00
188_A 21_V 0.96 0.00
230_Q 76_V 0.96 0.00
287_R 122_V 0.96 0.00
110_H 67_E 0.95 0.00
327_P 49_L 0.95 0.00
73_I 91_E 0.95 0.00
99_A 127_D 0.95 0.00
8_T 50_Q 0.95 0.00
319_A 138_S 0.94 0.00
184_S 81_L 0.94 0.00
322_G 103_A 0.94 0.00
283_M 46_R 0.93 0.00
297_F 29_T 0.93 0.00
52_V 94_G 0.92 0.00
67_G 27_G 0.92 0.00
280_A 107_V 0.92 0.00
214_L 27_G 0.92 0.00
76_V 23_K 0.90 0.00
255_L 51_A 0.90 0.00
108_P 68_P 0.89 0.00
154_L 14_T 0.89 0.00
185_K 19_E 0.89 0.00
141_Q 43_T 0.89 0.00
289_E 44_F 0.88 0.00
148_I 43_T 0.88 0.00
181_P 46_R 0.88 0.00
73_I 123_E 0.88 0.00
156_E 57_N 0.88 0.00
65_E 12_Q 0.87 0.00
162_A 47_G 0.87 0.00
265_M 39_A 0.87 0.00
302_G 77_Y 0.86 0.00
207_L 18_G 0.86 0.00
17_I 130_A 0.86 0.00
65_E 142_S 0.86 0.00
273_R 39_A 0.86 0.00
162_A 51_A 0.85 0.00
154_L 110_P 0.85 0.00
243_V 44_F 0.85 0.00
192_A 22_A 0.84 0.00
76_V 51_A 0.84 0.00
68_L 104_I 0.84 0.00
249_I 96_R 0.84 0.00
253_R 31_I 0.84 0.00
114_G 17_L 0.84 0.00
141_Q 18_G 0.84 0.00
271_A 39_A 0.83 0.00
327_P 64_T 0.83 0.00
184_S 76_V 0.83 0.00
302_G 144_G 0.83 0.00
185_K 20_R 0.83 0.00
277_A 22_A 0.83 0.00
92_A 22_A 0.83 0.00
320_D 48_F 0.82 0.00
166_F 111_Q 0.82 0.00
204_R 11_E 0.82 0.00
110_H 59_K 0.82 0.00
290_V 31_I 0.81 0.00
308_A 113_G 0.81 0.00
117_L 113_G 0.81 0.00
120_M 65_L 0.81 0.00
182_L 65_L 0.81 0.00
148_I 36_D 0.81 0.00
93_T 32_Y 0.80 0.00
5_G 63_Y 0.80 0.00
327_P 105_C 0.80 0.00
117_L 45_S 0.79 0.00
48_S 102_D 0.79 0.00
292_Y 96_R 0.79 0.00
328_R 45_S 0.78 0.00
119_P 94_G 0.78 0.00
104_V 110_P 0.78 0.00
57_P 46_R 0.78 0.00
220_N 79_F 0.78 0.00
266_A 118_P 0.77 0.00
200_P 68_P 0.77 0.00
152_E 45_S 0.77 0.00
18_Y 115_G 0.76 0.00
230_Q 91_E 0.76 0.00
129_P 111_Q 0.76 0.00
61_A 58_V 0.76 0.00
201_M 113_G 0.76 0.00
263_L 147_L 0.76 0.00
328_R 127_D 0.76 0.00
55_T 103_A 0.76 0.00
24_L 121_D 0.76 0.00
30_Y 107_V 0.76 0.00
8_T 125_H 0.76 0.00
38_D 67_E 0.76 0.00
120_M 17_L 0.76 0.00
218_A 37_L 0.76 0.00
104_V 34_Y 0.75 0.00
222_I 91_E 0.75 0.00
117_L 66_V 0.75 0.00
117_L 67_E 0.75 0.00
202_T 39_A 0.75 0.00
145_V 90_L 0.74 0.00
253_R 107_V 0.74 0.00
32_Q 118_P 0.74 0.00
103_D 50_Q 0.74 0.00
315_A 68_P 0.74 0.00
98_L 86_D 0.74 0.00
19_D 84_L 0.74 0.00
29_L 84_L 0.74 0.00
113_E 79_F 0.74 0.00
265_M 87_P 0.74 0.00
121_L 46_R 0.73 0.00
261_K 44_F 0.73 0.00
302_G 149_A 0.73 0.00
245_D 66_V 0.73 0.00
226_G 44_F 0.73 0.00
306_A 25_C 0.72 0.00
265_M 43_T 0.72 0.00
204_R 147_L 0.72 0.00
229_D 136_R 0.72 0.00
156_E 68_P 0.72 0.00
113_E 92_F 0.72 0.00
135_V 122_V 0.72 0.00
185_K 96_R 0.72 0.00
38_D 22_A 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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