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OPENSEQ.org

PNP - RS15
UniProt: P05055 - P0ADZ4
Length: 800
Sequences: 878
Seq/Len: 1.12
I_Prob: 0.00

PNP - Polyribonucleotide nucleotidyltransferase
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PNP
RS15 - 30S ribosomal protein S15
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RS15
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
143_I 4_S 1.19 0.00
113_V 87_L 1.07 0.00
337_T 15_F 0.97 0.00
653_Q 62_Q 0.91 0.00
632_I 82_I 0.87 0.00
273_I 10_K 0.86 0.00
518_I 71_K 0.85 0.00
250_A 33_T 0.83 0.00
134_A 40_Q 0.83 0.00
134_A 35_Q 0.81 0.00
85_S 64_R 0.81 0.00
540_A 48_K 0.81 0.00
62_N 35_Q 0.77 0.00
269_Q 29_V 0.77 0.00
168_D 10_K 0.76 0.00
385_Y 12_V 0.75 0.00
225_E 33_T 0.75 0.00
216_I 51_H 0.74 0.00
527_K 37_N 0.74 0.00
300_I 13_S 0.74 0.00
14_H 61_S 0.73 0.00
527_K 3_L 0.72 0.00
194_Q 33_T 0.72 0.00
154_V 77_R 0.71 0.00
130_A 15_F 0.71 0.00
185_A 58_R 0.70 0.00
171_K 59_M 0.70 0.00
86_E 87_L 0.70 0.00
67_T 61_S 0.70 0.00
107_F 65_K 0.70 0.00
616_T 87_L 0.69 0.00
25_R 4_S 0.69 0.00
197_S 84_R 0.69 0.00
20_T 50_H 0.69 0.00
511_I 50_H 0.68 0.00
473_D 68_D 0.68 0.00
341_A 74_D 0.68 0.00
87_G 16_G 0.68 0.00
337_T 10_K 0.67 0.00
649_V 6_E 0.67 0.00
407_A 35_Q 0.67 0.00
185_A 43_F 0.67 0.00
479_S 14_E 0.67 0.00
410_G 44_A 0.66 0.00
132_I 31_L 0.66 0.00
387_V 35_Q 0.66 0.00
40_V 62_Q 0.66 0.00
527_K 45_E 0.66 0.00
686_R 57_L 0.65 0.00
327_L 35_Q 0.65 0.00
684_R 65_K 0.65 0.00
171_K 15_F 0.65 0.00
104_P 71_K 0.65 0.00
517_E 29_V 0.65 0.00
460_A 77_R 0.65 0.00
686_R 61_S 0.65 0.00
438_S 59_M 0.64 0.00
470_K 31_L 0.64 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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