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OPENSEQ.org

LSPA - PABA
UniProt: P00804 - P00903
Length: 351
Sequences: 296
Seq/Len: 0.88
I_Prob: 0.00

LSPA - Lipoprotein signal peptidase
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: LSPA
PABA - Para-aminobenzoate synthase glutamine amidotransferase component II
Paralog alert: 0.89 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: HIS5 PABA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
101_Y 130_L 1.39 0.00
150_L 2_I 1.39 0.00
45_S 47_I 1.31 0.00
151_I 67_R 1.30 0.00
146_V 187_R 1.28 0.00
103_L 180_L 1.26 0.00
135_A 136_S 1.24 0.00
156_F 35_T 1.18 0.00
108_A 77_G 1.16 0.00
103_L 76_L 1.08 0.00
112_L 31_N 1.08 0.00
95_K 38_D 1.08 0.00
147_G 28_V 1.08 0.00
118_H 147_S 1.08 0.00
126_D 137_L 1.08 0.00
119_G 103_K 1.07 0.00
80_S 164_G 1.06 0.00
44_P 152_I 1.05 0.00
124_M 170_E 1.03 0.00
108_A 83_Q 1.01 0.00
137_F 28_V 1.01 0.00
68_Q 16_Y 1.01 0.00
100_A 23_G 1.00 0.00
42_L 151_E 0.98 0.00
139_L 7_N 0.97 0.00
139_L 187_R 0.97 0.00
106_G 170_E 0.95 0.00
125_I 147_S 0.95 0.00
46_L 121_P 0.95 0.00
125_I 42_L 0.94 0.00
58_F 85_M 0.93 0.00
63_D 179_Q 0.93 0.00
38_D 132_V 0.93 0.00
100_A 85_M 0.93 0.00
104_I 90_G 0.92 0.00
59_S 142_D 0.92 0.00
25_G 35_T 0.92 0.00
54_Y 152_I 0.92 0.00
42_L 156_R 0.91 0.00
95_K 47_I 0.90 0.00
119_G 164_G 0.90 0.00
44_P 38_D 0.90 0.00
108_A 128_H 0.89 0.00
80_S 133_E 0.89 0.00
71_F 158_R 0.89 0.00
72_F 141_F 0.89 0.00
78_G 75_I 0.88 0.00
127_F 147_S 0.88 0.00
156_F 111_G 0.88 0.00
104_I 58_E 0.87 0.00
156_F 137_L 0.87 0.00
103_L 26_V 0.87 0.00
135_A 166_Q 0.86 0.00
108_A 168_H 0.86 0.00
31_L 13_W 0.85 0.00
70_W 16_Y 0.85 0.00
82_I 42_L 0.84 0.00
58_F 178_H 0.84 0.00
89_R 130_L 0.84 0.00
25_G 69_Y 0.84 0.00
41_P 39_I 0.84 0.00
104_I 177_G 0.84 0.00
26_S 146_W 0.84 0.00
106_G 185_L 0.83 0.00
60_F 5_I 0.83 0.00
20_L 109_H 0.83 0.00
145_C 186_H 0.83 0.00
136_T 152_I 0.83 0.00
77_I 161_D 0.83 0.00
102_A 27_L 0.83 0.00
50_Y 138_P 0.83 0.00
119_G 23_G 0.83 0.00
46_L 75_I 0.83 0.00
28_Y 68_H 0.82 0.00
51_A 139_A 0.82 0.00
58_F 31_N 0.82 0.00
61_L 76_L 0.81 0.00
19_V 150_R 0.81 0.00
59_S 95_R 0.81 0.00
150_L 185_L 0.81 0.00
151_I 43_K 0.81 0.00
42_L 143_V 0.81 0.00
144_I 69_Y 0.80 0.00
47_N 122_L 0.80 0.00
129_V 20_C 0.80 0.00
35_A 187_R 0.79 0.00
75_I 64_D 0.79 0.00
113_F 118_L 0.79 0.00
99_I 67_R 0.79 0.00
126_D 2_I 0.79 0.00
47_N 172_I 0.78 0.00
46_L 38_D 0.78 0.00
20_L 35_T 0.78 0.00
139_L 138_P 0.78 0.00
37_G 120_N 0.78 0.00
71_F 152_I 0.78 0.00
51_A 11_F 0.78 0.00
15_L 19_F 0.78 0.00
29_L 167_F 0.78 0.00
116_L 72_R 0.77 0.00
42_L 179_Q 0.77 0.00
17_V 99_V 0.77 0.00
119_G 91_G 0.77 0.00
42_L 23_G 0.77 0.00
18_V 92_K 0.77 0.00
159_S 27_L 0.77 0.00
21_I 140_C 0.77 0.00
158_P 135_D 0.77 0.00
153_L 120_N 0.77 0.00
58_F 137_L 0.76 0.00
106_G 89_F 0.76 0.00
82_I 146_W 0.76 0.00
124_M 110_N 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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