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OPENSEQ.org

KHSE - RSMA
UniProt: P00547 - P06992
Length: 583
Sequences: 409
Seq/Len: 0.75
I_Prob: 0.00

KHSE - Homoserine kinase
Paralog alert: 0.76 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: ISPE KHSE
RSMA - Ribosomal RNA small subunit methyltransferase A
Paralog alert: 0.09 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSMA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
59_E 122_L 1.28 0.00
103_V 93_M 1.22 0.00
6_A 164_A 1.20 0.00
188_R 93_M 1.18 0.00
265_T 192_V 1.17 0.00
117_P 83_P 1.11 0.00
222_A 60_D 1.11 0.00
77_G 225_I 1.11 0.00
38_V 118_I 1.07 0.00
84_M 193_R 1.07 0.00
94_S 20_L 1.05 0.00
285_K 42_V 1.05 0.00
8_A 59_L 1.04 0.00
19_V 138_F 1.02 0.00
236_E 118_I 1.02 0.00
267_F 136_M 1.00 0.00
67_Q 197_H 1.00 0.00
239_L 186_K 1.00 0.00
106_A 242_G 0.99 0.00
107_L 152_P 0.98 0.00
234_Y 210_L 0.97 0.00
73_C 50_A 0.96 0.00
153_L 253_S 0.95 0.00
96_L 126_L 0.94 0.00
284_G 37_K 0.94 0.00
244_Q 176_V 0.93 0.00
262_S 224_T 0.93 0.00
269_L 245_P 0.93 0.00
219_P 133_I 0.93 0.00
64_I 111_F 0.93 0.00
149_G 64_V 0.92 0.00
111_N 227_N 0.92 0.00
210_F 214_T 0.92 0.00
271_D 95_F 0.92 0.00
14_S 177_P 0.92 0.00
229_V 92_A 0.90 0.00
10_S 213_I 0.90 0.00
111_N 247_M 0.89 0.00
66_Y 194_L 0.89 0.00
30_A 220_Q 0.89 0.00
126_L 239_T 0.88 0.00
114_C 30_V 0.88 0.00
124_L 40_A 0.88 0.00
53_A 70_D 0.88 0.00
66_Y 21_N 0.88 0.00
191_L 238_L 0.88 0.00
27_V 146_N 0.87 0.00
146_C 142_K 0.87 0.00
209_G 80_F 0.87 0.00
216_S 236_E 0.87 0.00
182_V 50_A 0.87 0.00
212_H 164_A 0.87 0.00
35_V 173_V 0.87 0.00
191_L 57_E 0.86 0.00
222_A 256_Q 0.86 0.00
81_P 137_H 0.85 0.00
127_M 243_I 0.85 0.00
256_A 60_D 0.85 0.00
59_E 67_L 0.85 0.00
258_G 251_N 0.84 0.00
206_H 41_M 0.84 0.00
280_A 214_T 0.84 0.00
97_G 199_T 0.83 0.00
34_D 39_Q 0.83 0.00
232_E 174_L 0.83 0.00
78_K 61_Q 0.83 0.00
116_K 187_V 0.83 0.00
130_L 65_I 0.83 0.00
126_L 158_G 0.82 0.00
85_T 214_T 0.82 0.00
40_A 255_A 0.82 0.00
90_M 39_Q 0.82 0.00
181_K 109_R 0.82 0.00
235_R 95_F 0.82 0.00
276_A 65_I 0.82 0.00
268_A 15_F 0.81 0.00
69_W 249_A 0.81 0.00
32_L 79_P 0.81 0.00
64_I 230_G 0.81 0.00
47_N 31_S 0.81 0.00
80_I 119_S 0.81 0.00
157_E 26_I 0.81 0.00
12_N 144_V 0.81 0.00
209_G 8_G 0.81 0.00
102_S 62_L 0.81 0.00
46_L 154_S 0.80 0.00
174_V 158_G 0.80 0.00
191_L 125_H 0.80 0.00
177_Y 119_S 0.80 0.00
78_K 133_I 0.80 0.00
33_G 194_L 0.80 0.00
147_F 127_F 0.80 0.00
97_G 179_S 0.80 0.00
175_L 88_Y 0.80 0.00
68_C 152_P 0.80 0.00
19_V 213_I 0.80 0.00
115_G 259_Q 0.80 0.00
110_M 229_L 0.80 0.00
220_E 236_E 0.79 0.00
46_L 192_V 0.79 0.00
127_M 133_I 0.79 0.00
154_M 163_M 0.79 0.00
103_V 154_S 0.79 0.00
264_P 261_A 0.78 0.00
164_Q 231_N 0.78 0.00
217_R 256_Q 0.78 0.00
173_W 120_T 0.78 0.00
48_N 21_N 0.78 0.00
257_S 158_G 0.78 0.00
70_E 195_V 0.78 0.00
125_A 80_F 0.77 0.00
191_L 84_K 0.77 0.00
85_T 255_A 0.77 0.00
167_G 208_R 0.77 0.00
8_A 188_D 0.77 0.00
16_G 260_M 0.77 0.00
178_P 119_S 0.77 0.00
222_A 86_T 0.77 0.00
187_A 216_E 0.77 0.00
125_A 208_R 0.77 0.00
62_E 96_N 0.77 0.00
44_F 119_S 0.77 0.00
181_K 249_A 0.77 0.00
114_C 26_I 0.77 0.00
171_W 186_K 0.77 0.00
35_V 260_M 0.77 0.00
118_L 171_I 0.76 0.00
279_V 243_I 0.76 0.00
8_A 177_P 0.76 0.00
27_V 213_I 0.76 0.00
256_A 133_I 0.76 0.00
124_L 195_V 0.76 0.00
79_Q 242_G 0.75 0.00
73_C 133_I 0.75 0.00
249_V 24_F 0.75 0.00
103_V 15_F 0.75 0.00
39_E 154_S 0.75 0.00
235_R 33_I 0.75 0.00
13_M 128_S 0.75 0.00
44_F 88_Y 0.75 0.00
77_G 236_E 0.75 0.00
106_A 177_P 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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